Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0790 |
Symbol | pgk |
ID | 5661189 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 977642 |
End bp | 978817 |
Gene Length | 1176 bp |
Protein Length | 391 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641235335 |
Product | phosphoglycerate kinase |
Protein accession | YP_001500652 |
Protein GI | 157960618 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0126] 3-phosphoglycerate kinase |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.250302 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGATTC TTAATATGAA AGATTTAGAC CTTCAAGGTA AGCGTGTGCT TATTCGTGAA GATCTTAACG TACCAGTCAG CGATGGTGTG GTAACCAGTG ACGCGCGTCT GCGTGCTTCT CTACCAACGA TTAAGCTTGC GCTTGAAAAA GGTGCGGCGG TTATGGTGAT GTCTCACCTA GGCCGTCCAA CTGAAGGCGA GTTCAATGCT GAGTTCTCTA TGCAGCCTGT AGTTGATTAC CTAACAAAGG CGCTAGATTG CCCTGTACGC CTAGCAGCAG ACTACCTAGA CGGCATCGAA GTGGCTGTCG GTGAAGTGGT AGTGTTTGAA AACGTGCGTT TTAACTTGGG TGAGAAGAAG AACGACGAAG CGCTGGCTAA GAAGATGGCG GCACTTTGTG ACGTATACGT GATGGATGCA TTCGGCACGG CTCACCGCGC ACAAGCATCG ACTCACGGTG TTGGTCTGCA CGCGCCTATC GCTTGTGCGG GTCCATTGTT AGCGGGTGAG TTAGAAGCCT TAGGTAAGGC TCTTGATAAC CCAGCACGCC CAATGGTAGC CATTGTTGGT GGTTCTAAAG TTTCAACAAA ACTGACAGTG CTTGAAAGCC TTTCAACTAA AGTTGACCAA CTTGTAGTGG GTGGCGGCAT CGCCAACACT TTCGTTGCTG CAGCAGGCCA CAAGGTGGGT AAGTCGCTTT ATGAGGCCGA CCTGATTGAA GAAGCTCAAC GCCTTGTTGC TAATGCGCAG AGCCGTGGTG GTGACATTCC AGTACCTACT GATGTGGTTG TTGCAGGCGA GTTCAGCCCT ACCGCAACTG CAACGCTGAA AGATGTAAGC GATGTATCTG ACACAGATAT GATTTTCGAT ATCGGCCCAG ATAGCGCCGA AGCTTTAGCC GAGATCATCA AAAATGCTGG CACGGTTGTA TGGAACGGTC CAGTCGGTGT ATTTGAGTTT GATCAGTTCG GTGAAGGGAC TAAGCGTATT GCTCAAGCAA TTGCCGAGTC AAATGCCTTC TCTATCGCTG GCGGTGGTGA CACATTAGCG GCTGTCGATA AGTATGGTAT CGCCGACAAG GTGTCTTATA TCTCAACGGG TGGCGGCGCT TTCCTAGAGT TTTTAGAAGG AAAAGAGTTG CCAGCAGTTG CCATGCTTGA GAGCCGCGGC CAGTAA
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Protein sequence | MTILNMKDLD LQGKRVLIRE DLNVPVSDGV VTSDARLRAS LPTIKLALEK GAAVMVMSHL GRPTEGEFNA EFSMQPVVDY LTKALDCPVR LAADYLDGIE VAVGEVVVFE NVRFNLGEKK NDEALAKKMA ALCDVYVMDA FGTAHRAQAS THGVGLHAPI ACAGPLLAGE LEALGKALDN PARPMVAIVG GSKVSTKLTV LESLSTKVDQ LVVGGGIANT FVAAAGHKVG KSLYEADLIE EAQRLVANAQ SRGGDIPVPT DVVVAGEFSP TATATLKDVS DVSDTDMIFD IGPDSAEALA EIIKNAGTVV WNGPVGVFEF DQFGEGTKRI AQAIAESNAF SIAGGGDTLA AVDKYGIADK VSYISTGGGA FLEFLEGKEL PAVAMLESRG Q
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