| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0754 |
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| Symbol | |
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| ID | 5661153 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 932673 |
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| End bp | 936995 |
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| Gene Length | 4323 bp |
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| Protein Length | 1440 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641235299 |
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| Product | formate dehydrogenase, alpha subunit |
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| Protein accession | YP_001500616 |
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| Protein GI | 157960582 |
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| COG category | [E] Amino acid transport and metabolism
[R] General function prediction only |
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| COG ID | [COG0493] NADPH-dependent glutamate synthase beta chain and related oxidoreductases
[COG3383] Uncharacterized anaerobic dehydrogenase |
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| TIGRFAM ID | [TIGR01591] formate dehydrogenase, alpha subunit, archaeal-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAACAAA TAATAATTGA TGGCAAGTCC CTACTAGCCA ATCAGCAAGA CACCCTACTC
GATGCAGCAC TAAGCGCAGA CATCGCTATT CCGAATCTTT GTAAGAGCAA AGCCAGCTCT
TTGGTCCATG ACAGCAAACA GCACTGCAAC CTTTGCCATG TAGAGCTTGT TGGCCCTGAT
AACAACATCC TCAATGTGCG CGCCTGTGAG ACACGAGTTG CTGACATCTA TGAGCAAAAC
ATTGAAGTCA TCACCCAGTC TGCAGCGCTG AGCAAACAGC GCAAGGCCGC ACTACAAGTG
ATTTTGTCAA ATCACTTCGC CGACTGTGAA GCGCCGTGCC AAACTGCCTG CCCTGCTGGC
GTCGATGTGC AGTCCTATCT GTATCATATT GCTCAAGGTG ACCACAGCGA AGCGGTTAAA
GTCATTAAGC AGACCTTACC TTTGCCACTG TCTATTGGCC GTGTCTGCCC CGCTTTTTGT
GAAACAGAGT GCCGCCGCGG ACTCGTAGAT GAGCCTGTCG CTATTCGCCA ATTGAAGCGC
CACGCTGCCG ACTTAGATCT TGAGGGCGAG AGCCCGTATG TGCCTCCTAG AGCGCCTGCA
ACCAATAAGA AAGTCGCCAT AATAGGCAGT GGCCCAGCAG GTATTTCTGC GGGTTATTAC
CTATCTAACA ACGGCCACGA CGTGACGATT TTTGAGTCTA TGCCACAAGC GGGCGGCTGG
TTACGTTATG GCATTCCTGA GTACCGTCTA CCTAAAGCCA TTCTCGATAA AGAGATCGCG
CTGCTGTGTA AAAACGGTCT CAATATTCAA ACCGACACCC GCCTTGGCCG CGATATCCAC
CTTAACGGCT TGATTGAAGG CTTTGATGCG GTCTGTTTAG CGATTGGCGC GCAAAAAGCC
GTGCCAATGA ACTACCCAGG TATCGAACTC GATGGCTGTT ATTTAGGTGT GGATTACCTA
AAAGATTACT GCACCAACAA GCAATATGTG ACGGGCAAGA AGGTTGCCGT TATCGGCGGC
GGTAATACGG CCATTGATTG CGCCCGCACC GCTAAACGCG ATGGCGCAGA TGTGACGCTT
GTCTACCGTC GTACTCGCGA CGAGATGCCA GCCGAAGACT ATGAAATTCA TGAAGCCGAG
CAAGAAGGGA TTAAGTTCCA CTTCTTGACC AACCCGATTG AGAATCACAG CGATGATAAC
GGCCGAGTGG CCAGCGTTAC CTTTGAGGTC ATGGCACTTG GCGAGCCAGA TGCCTCCGGT
CGTCGTAGCC CAGTAGCGAC TGGTGAAACC TTTGTCGAAG CATTCGATAC GGTGATCCCT
GCGGTGTCGC AAACTCCTGA CATGGACTTT CTTGAGCACC CTCAGAGCCA GCTAGCCACT
GGTGAAGTCG CACTAACCCG CTGGAACACC TTCGAAGGCT GTGAGCACAC CATGTCGGCG
GGTCAATCTG CCGGGCTAGA TAAACTCTTT GTCATCGGCG ACTCACGCAC AGGCCCTGCA
ACGGCAGTTG CCGCCGTTGC TGATGGTCGC AAGGCTGCCG ATGCTATCGA GAAACTACTA
AGCCAAGGGC TAACTTGTGA GCTAGTAAAG CAGGCATTTA ATTCGACCAA GGCGGCTAAA
ACTAGCAGCC TTAAATCATT TAAAGCCGAC GCACTTTATC CGTCGACTCA GGCGCAGGCT
CGCAGCAAAA TGCCTGAGCT CAATGAGCTG CAACGGGCGT TAAACTTCAG TGAAGTCGAG
CTGGGGTTTG AAGCCGATGA AGCCATGAAG GAAGCGGCGC GCTGCCTTGA ATGCGCCTGT
CAGGCCAACA CTGATTGCAA GCTACGTGAT TACGCTACCG AATATAAGGT TCAGGCTTCT
GAGCTAGATA CCAGCGCGGC GCAGCAGTTT AGTGTCGACA CCAGTGCACC ATTTATCACC
TTCGATGCTA ACCGCTGTAT CAGCTGTGGT TCATGTGTAG AGATCTGTCA TAGTGCCAGT
GGTCATAACG CCATCTCGTT TGCCAAAGAT CATTACCAAG CCATCCCTAT CTCTTGTGAT
AGCTCATGTG CCAGCTCATA TGCCAGCTTA CGTGATAGTG ATGAGCGTAG AGCGCCGCGT
GTCGGCTTTA GCGCCTCGAT GAACGACAGT GACTGCGTAC AGTGCGGTAA CTGCGTGCAA
GTGTGCCCAA CGGGTGCATT AGTCGATGCC CGTAATAAGA CCCAAGGTTT AACTACGGCG
CAAAAGGCTC CGCTTAAAAC GGTATCCACC ATCTGTACCT ACTGCGGTAT CGGCTGCCGA
ATCAACATGC ATGTCGATGA GCAGAAGAAC CAGATTTTAC AGATCAGTGG CGATGCGTCA
TCACCAGTAA ACGATGGCAT GTTGTGCGTA AAAGGTCGCT TTGGCTTTGA CTTCGTTGGC
AGTGACAAAC GCCTAACCAC ACCGCTTATT CGTAAAAATG GTGAGCTAGT TCCTGCAAGT
TGGGATGAAG CCATATCTGT CATTGCTCAG CGCTTTACCC AGATAAAACA AGTCTATGGC
AACAAGGCGA TTGCAGGACT TTCTTCTGCC AAAGCTACCA ACGAAGATAA CTACGTTTTC
CAGAAGTTCT TCCGTAGCGT GCTGGGTAAT AACAACGTCG ACCACTGCGC CCGTCTTTGC
CACGCATCAA CGGTAACAGC CCTGCGTGAA AGCCTTGGCA GCGGCGCGAT GACAAACGAT
ATTCCGAGCA TCAAAGATAG TGACCTTATC TTTATCCTTG GCTCAGACAC CGAAAGTGCT
CACCCAATCA TCGCCTCTAA GATCAAACAA GCGCTGAAAG AGCATGGTGC ACGCCTGATC
GTTGCCGACC CTAAACGTGT CTCTATTGCC GATAAAGCTC AGCTTTATGT GGCACAAAGA
CCGGGTTCAG ATGTGATGCT GCTTAACGCG ATTATGCAGC AGATCATCAA GAATGATTGG
CATGACTTAG ATTACATTCA GGCTAGAGTC GAAGGCTTCA GTCAGCTCTA TGATGAGGTG
ATGAGCCCTG ATTACAGCCC GAAAAATGCT GAGCTAATCA CTGGGGTTAG CGCTAAAGAT
ATTATCGAAA TGGCGCGCCT TATCGGTACC GCAGAGAAAA CGGCGGTCTA TTATGCGATG
GGGGTCACCC AGCATACTTC GGGCCACGAT AACGTTACCG CGATATCTAA CCTGCAGCTA
TTGTGCGGAA ATATCGGCCT TAAAGGCGCT GGCATTAACC CACTTCGTGG CCAGAGTAAC
GTACAGGGTG CCTGTGATAT GGGCGCGCTG CCCAACTACT TCAGTGGTTA TCAGAAACTT
GATGATCCGT TAGTGCAGAT GCGCTTCCGT GAAGCTTGGG GCAAAGAAGA TCTTTGCGCC
GATATTGGTT TTTCTGCAAC AGAGATGATG CATGCCCTGA CACACGGCGA GCTAAAAGGC
TTATATGTGA TGGGTGAAAA CCCAGTGCTA AGCGATCCTG ATCAGAAGCA TGTCCTACAA
GGCTTAGCTG CCGCTGAATT TGTGGTGGTG CAGGATATCT TCCTAACCGA AACTGCCGAG
CTAGCCGACG TAGTCCTGCC TGCCGCAGCC TTTGCCGAGA AGCTAGGCCA CTTTACCAAT
ACTGAGCGCC GCGTACAGCA GCTGCTGCCT GCGGTAACAC CACCGGGATT AGCCAAGAAC
GATTGGCAGA TCATCCAGCT AATTGCTAGC CAAATGGGCG AAGACTGGGG CTACCAAAAT
GAAAGACAGA TCTGGCATGA GATCACCGAA GTGACACCAC AATACCGTGG TATTACTTGG
AAAGTGATAG ATAGCCTAAC GGAAAATGGT CGTCTAGGAC TGCAGTGGCC ATGCCCGGCA
GAAGGTCATC CGGGTACACC AATTCTGCAT ACATCTCTGT TTACTCACGG CAAAGGTAAG
ATGCGCCCAG TGCACTACCG CCTACCCGCT GAGATGCCAT GTGACGAGTA TCCACTGTTC
TTGTCGACAG GCCGTTTGTT GGAGCAGTTC CACACTGGCA CCATGACCCG TAAAACCGAA
GGCCTTAACC AACTCGGTAG CGCCAAGGTG ATGATCTCGG TATTCGATGC CGAGAAGCTT
GGGGTGAATA ACGGTGACAT GCTAAAGCTA AGCACAAGGC GCGGCGAAAT TGAGATCCAA
GCCTTCGTCA CCAAGCGTGC CCAAGCAGGC GTATTATTCC TGCCGTTCCA CTTTGTTGAA
TCGGCAGCCA ATAAGCTTAC CAACAACGCA CTCGACCCTG TGGCGAAAAT CCCTGAGTTT
AAGGTGTGTG CTGTCAAAGC TGAAAAAGTG GCTGAAAAGC TAGCCGAGGC AGAACTCGTC
TAG
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| Protein sequence | MKQIIIDGKS LLANQQDTLL DAALSADIAI PNLCKSKASS LVHDSKQHCN LCHVELVGPD
NNILNVRACE TRVADIYEQN IEVITQSAAL SKQRKAALQV ILSNHFADCE APCQTACPAG
VDVQSYLYHI AQGDHSEAVK VIKQTLPLPL SIGRVCPAFC ETECRRGLVD EPVAIRQLKR
HAADLDLEGE SPYVPPRAPA TNKKVAIIGS GPAGISAGYY LSNNGHDVTI FESMPQAGGW
LRYGIPEYRL PKAILDKEIA LLCKNGLNIQ TDTRLGRDIH LNGLIEGFDA VCLAIGAQKA
VPMNYPGIEL DGCYLGVDYL KDYCTNKQYV TGKKVAVIGG GNTAIDCART AKRDGADVTL
VYRRTRDEMP AEDYEIHEAE QEGIKFHFLT NPIENHSDDN GRVASVTFEV MALGEPDASG
RRSPVATGET FVEAFDTVIP AVSQTPDMDF LEHPQSQLAT GEVALTRWNT FEGCEHTMSA
GQSAGLDKLF VIGDSRTGPA TAVAAVADGR KAADAIEKLL SQGLTCELVK QAFNSTKAAK
TSSLKSFKAD ALYPSTQAQA RSKMPELNEL QRALNFSEVE LGFEADEAMK EAARCLECAC
QANTDCKLRD YATEYKVQAS ELDTSAAQQF SVDTSAPFIT FDANRCISCG SCVEICHSAS
GHNAISFAKD HYQAIPISCD SSCASSYASL RDSDERRAPR VGFSASMNDS DCVQCGNCVQ
VCPTGALVDA RNKTQGLTTA QKAPLKTVST ICTYCGIGCR INMHVDEQKN QILQISGDAS
SPVNDGMLCV KGRFGFDFVG SDKRLTTPLI RKNGELVPAS WDEAISVIAQ RFTQIKQVYG
NKAIAGLSSA KATNEDNYVF QKFFRSVLGN NNVDHCARLC HASTVTALRE SLGSGAMTND
IPSIKDSDLI FILGSDTESA HPIIASKIKQ ALKEHGARLI VADPKRVSIA DKAQLYVAQR
PGSDVMLLNA IMQQIIKNDW HDLDYIQARV EGFSQLYDEV MSPDYSPKNA ELITGVSAKD
IIEMARLIGT AEKTAVYYAM GVTQHTSGHD NVTAISNLQL LCGNIGLKGA GINPLRGQSN
VQGACDMGAL PNYFSGYQKL DDPLVQMRFR EAWGKEDLCA DIGFSATEMM HALTHGELKG
LYVMGENPVL SDPDQKHVLQ GLAAAEFVVV QDIFLTETAE LADVVLPAAA FAEKLGHFTN
TERRVQQLLP AVTPPGLAKN DWQIIQLIAS QMGEDWGYQN ERQIWHEITE VTPQYRGITW
KVIDSLTENG RLGLQWPCPA EGHPGTPILH TSLFTHGKGK MRPVHYRLPA EMPCDEYPLF
LSTGRLLEQF HTGTMTRKTE GLNQLGSAKV MISVFDAEKL GVNNGDMLKL STRRGEIEIQ
AFVTKRAQAG VLFLPFHFVE SAANKLTNNA LDPVAKIPEF KVCAVKAEKV AEKLAEAELV
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