Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0722 |
Symbol | |
ID | 5661121 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 893397 |
End bp | 895187 |
Gene Length | 1791 bp |
Protein Length | 596 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641235267 |
Product | flavocytochrome c |
Protein accession | YP_001500584 |
Protein GI | 157960550 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01813] flavocytochrome c |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAACT TTAAAAAAGC AGTGTGTATT GCAACACTTC TAGGCTCAGC AGGCTTTATG TCTACCGCGA TTGCCGCTGA TAACTTGGCT GAGTTCCACG GTGAAAACCA AGAGTGTGAT AGCTGCCATA TGCCAGACGG TGAGCTATCG AACGACAGCT TAACCTATGA GAATGCGCAG TGTGTATCTT GTCACGGTAC ACTGGCTGAA GTTGCTGAAG AAACTAAACA TGAGCACTAC AATGCCCATG AATCTCATTT CCCTGGCGAT GTGTCTTGTA CTTCTTGTCA CAGCGCTCAC GAAAAATCTA TGGTTTACTG TGACTCTTGC CATAGCTTCG ACTTTGACAT GCCTTACACT AAGAAGTGGG AACGTCACGA GCCAAGCATC GATGAGTTAT TAAAAGACCA GTCTGACCGT CAGGCGGCGC TAGCCGAAGC ACCACGTGAC ACAGTTGATG TTGTGGTTGT TGGTTCTGGT GGTGCAGGTT TCTCTGCTGC CGTATCAGCA CACGATCACG GCGCTAAAGT GATTCTAATT GAAAAAGAGC CAGTTATTGG TGGTAACGCT AAGCTTGCAG CCGGTGGTAT GAACGCCGCT TGGACTGACC AACAAAAAGC GAAAGGCATC AAAGATAGTG TTGAGTCTAT GTACAAAGAC ACTATGAAAG GTGGCCGTGA CTTAAACGAG CCTGCACTAG TTGAAGTATT AACTTCACAC TCTAAAGGTT CAGTTGACTG GTTAACTGGC ATGGGCGCAG ATCTTAACGA CGTAGGTCGT ATGGGTGGTG CTTCTGCTAA CCGTTCACAC CGTCCAACAG GTGGTGCAGG TGTTGGTGCT CACGTAATCC AAGTGCTTTA CGATAACGCC GTTAAGCGTG ACGTTGATAT GCGCATGAAC ACACGTGGTA TCGAAATCCT TAAAGACGAC AAAGGCAACG TTAAGGGCCT ACTCGTTAAA GGCATGTACA AAGGTTACTA CTGGATTAAA GCTGACGCCG TTATCCTAGC AACAGGTGGT TTTGCTAAGA ACAATGACCG TGTAGCTAAG CTTGATCCTA AGCTAAAAGG CTTTATCTCT ACTAACCAAC CAGGTGCGAC TGGTGACGGT ATCGATGTTG CAGCAAATGC TGGCGCTGCG ATGACTGATC TACAGTACAT CCAGGCTCAC CCTACGCTAT CTGTTAAAGG TGGTGTGATG GTAACTGAAG CGGTTCGTGG TAACGGTGCA ATCTTGGTTA ACCGTGAAGG TAAGCGCTTC GTTAACGAAA TCACCACTCG TGATAAGGCT TCTGCAGCTA TTCTGAACCA AACGGGTAAG TCTGCATTCC TAATCTTTGA TGACTCAGTA CGTAAGTCTC TAAGTAAGAT TGATAAGTAT ATCGGTCTAG GTGTTGCTCC AAGTGCTGAC TCGCTAGTTA AGCTAGGTGA GATGGAACAG ATTGATGGTA AAGCTCTAAC TGAAACTGTT GCGCGCTACA ACAGCCTAGT GAAGAGCGGT AAAGACGCAG ACTTCGGTCG TCCTAACCTA CCTCGTGCCC TTAACGAAGG TAACTACTAC GCAATCGAAG TGACTCCTGG TGTTCACCAC ACTATGGGCG GCGTGAAGAT TGATTCTAAA GCTGAAATCA TGAACGCTAA GCAGCAGGTT ATCCCAGGTC TATACGGCGC GGGTGAAGTA ACTGGTGGTG TTCACGGTGC TAACCGTCTA GGTGGTAACG CTATCTCTGA TATCGTCACC TTCGGTAGAA TGGCTGGTGA GAATGCAGCC GAGTACTCTA AAAAGAATTA G
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Protein sequence | MKNFKKAVCI ATLLGSAGFM STAIAADNLA EFHGENQECD SCHMPDGELS NDSLTYENAQ CVSCHGTLAE VAEETKHEHY NAHESHFPGD VSCTSCHSAH EKSMVYCDSC HSFDFDMPYT KKWERHEPSI DELLKDQSDR QAALAEAPRD TVDVVVVGSG GAGFSAAVSA HDHGAKVILI EKEPVIGGNA KLAAGGMNAA WTDQQKAKGI KDSVESMYKD TMKGGRDLNE PALVEVLTSH SKGSVDWLTG MGADLNDVGR MGGASANRSH RPTGGAGVGA HVIQVLYDNA VKRDVDMRMN TRGIEILKDD KGNVKGLLVK GMYKGYYWIK ADAVILATGG FAKNNDRVAK LDPKLKGFIS TNQPGATGDG IDVAANAGAA MTDLQYIQAH PTLSVKGGVM VTEAVRGNGA ILVNREGKRF VNEITTRDKA SAAILNQTGK SAFLIFDDSV RKSLSKIDKY IGLGVAPSAD SLVKLGEMEQ IDGKALTETV ARYNSLVKSG KDADFGRPNL PRALNEGNYY AIEVTPGVHH TMGGVKIDSK AEIMNAKQQV IPGLYGAGEV TGGVHGANRL GGNAISDIVT FGRMAGENAA EYSKKN
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