Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0720 |
Symbol | |
ID | 5661119 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 889568 |
End bp | 890950 |
Gene Length | 1383 bp |
Protein Length | 460 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641235265 |
Product | two component, sigma54 specific, Fis family transcriptional regulator |
Protein accession | YP_001500582 |
Protein GI | 157960548 |
COG category | [T] Signal transduction mechanisms |
COG ID | [COG2204] Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAACTCG CCAGAAATAT TCTTCTTGTT GACGATGAAG CCTCTTGGCT TAGAACACTC TCCATCACGC TTAATCGTCT CGTGCCAGAA GCGACTATCG ATACCTGTGT CGATAGTCGC CAAGTGATGA GCCGATTGCA GACTGGCGAC TATGCGCTGG TACTGCTAGA TCTGACCATG CCGTTTCATT CCGGCGAAGA CTTGCTTGAG ATGATCCGCA AAGAGTTTCC TAAGACCCGG GTCATCATAG TCACGGGGGT TAACGAGGTC GACACTGCGG TGCGCTGCAT TAAAAACGGT GCCTATGACT ACTTTATCAA AACAGACAAG GTCGACGATC TCGCCCGCAC CGTTCGCCGA GCATTAGAAG TAGTAGGTCT TGAGCGTAAC TATCTACGAA TTAAAGAAAG CTTCTTAAGT CGCACATTAA GCCGCCCAGA AGTGTTCAAT AATATCCTCA CCTGTGAACC CGCGCTGCTG GATCAGTTCC GCTATTTAGA GGCCGTAGCC TTAAGCCCCG AGCCCATTCT TATTCAAGGG GAAAGCGGCA CAGGTAAGGA TGAGTTTGCC AAGTCCTGTC ATCAGCTTAT TTGCGCCGAT GCGCCCTTCA TTAACGTCAA CTTGGCGGGT ATTAGCACTT CGGCGTTCGA GCTACAGTTA TTTGGCCAAC TGCATACCGA TGATGACGGC AAAGTTAGCG CTCAAGCAGG CGTGCTGCAC CAAGTAAAAA ACGGCCTACT CTACCTCAAT GAGATTGGTG ATCTCCCCAT TGAGGCTCAG GCAAAGCTTG TGGATGTGAT TGAGCATAAG CAGTATTACC CTATCGGCAG CGACAGAGCG TACCCGATAT TGTGTAAAAT TATCACCTCC ACCCAGCACG ACCTGTTAGC GCTGAATCAA GCGGGCAAGT TCAGGAGTGA CTTGTTATAT CGCCTACGCT CACACACCAT CAAGCTGCCA CCGCTGAGGC AACGTAAGCT AGATCTGTCG ATGCTGATCA ACCACTTTAT TTGTTTAGCG GCCAAAGAGA TGGGCTTATC AGAGCCCCAG CAACCGAGCT CGCTAGCGCA GCAGTTATCA GAATATGCTT TCCCTGGTAA TTTACATGAG CTTAAAGGCA TGGTGTTTGA TGCAGTGAGC CGTAGCGACG GTATTGCGCT GAATATCACG CCCTTTATGG AGGCGATAAA CCTAAGCAAG TCGAACGTTA CCACTGACAG CGACCAGCTT ATCTTCCCTA AGATTTTGCC CACATTAGCG CAGATGAGTG ACGCCCTCAT TCAAGAGGCG CTGAACCGCA CCGCCAATAA TCAAACTGCA GCGGCGCAGA TGCTCGGCAT CAGCCAGAGT GCGCTAAGCC GTCGCATAAC TAAAGAAAAA TAG
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Protein sequence | MKLARNILLV DDEASWLRTL SITLNRLVPE ATIDTCVDSR QVMSRLQTGD YALVLLDLTM PFHSGEDLLE MIRKEFPKTR VIIVTGVNEV DTAVRCIKNG AYDYFIKTDK VDDLARTVRR ALEVVGLERN YLRIKESFLS RTLSRPEVFN NILTCEPALL DQFRYLEAVA LSPEPILIQG ESGTGKDEFA KSCHQLICAD APFINVNLAG ISTSAFELQL FGQLHTDDDG KVSAQAGVLH QVKNGLLYLN EIGDLPIEAQ AKLVDVIEHK QYYPIGSDRA YPILCKIITS TQHDLLALNQ AGKFRSDLLY RLRSHTIKLP PLRQRKLDLS MLINHFICLA AKEMGLSEPQ QPSSLAQQLS EYAFPGNLHE LKGMVFDAVS RSDGIALNIT PFMEAINLSK SNVTTDSDQL IFPKILPTLA QMSDALIQEA LNRTANNQTA AAQMLGISQS ALSRRITKEK
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