Gene Spea_0625 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0625 
Symbol 
ID5661025 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp769086 
End bp770192 
Gene Length1107 bp 
Protein Length368 aa 
Translation table11 
GC content50% 
IMG OID641235171 
Producthypothetical protein 
Protein accessionYP_001500488 
Protein GI157960454 
COG category[R] General function prediction only 
COG ID[COG5621] Predicted secreted hydrolase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGCTGT ATCCCTGTTT ACTGCTACTT ACCTTACTTT ACGGCTGTGA CTCAGAACCA 
AACAAGTCAC CTACAGGTAT GGGGCAACGA CTCGATGGAG ACACCACCCA CTACACTCCT
GTCGTTCCGG GAAAAACACT CTCCTTCCCA ACTGACCACA TGGCCCATGA CTACTTCAGG
CAGGAGTGGT GGTATTTGAC TGCCAATCTA ACAACCGAAA CAGGAGAATC ACTCGGCTTA
CAATGGACGC AATTTCGTAT CGCTCTATCC CCTCCAGATC CTGATGAAAA GGCAAGCACA
CAAGACTTAG CCCAATCGAG TTGGCAGACA CAGCAGCTTT ATATGTCCCA TAGCGCGATC
ACCACACAAA CCCAGCACCT CGCAGCAGAA AGATGGTCTA GAGGCCATCC ATTTCTTGCT
GGTACTCAAA CATCGCCGCT GGTGATTAAG CTAGATGATT GGCAATGGCG TAGCAATGAC
GAGCAGTTAT TTCCTGCCAC CTTATCCGTA GCTACCGATA GCTTTAGCTA CCAGCTCAAA
CTCAATAGTC AGGCTCCCTT TCAGCTTCAA GGCGATAACG GCTATAGCCG AAAAAATGCC
GCCGGCACAG TGGCGAGCTA TTATTATAGC CAGCCTTTTA TCAAGGTCAG TGGCACTGTC
GAGCGAGATG GCAAAACAAT TCAGGTGAAC GGTGATGGCT GGCTCGATAG AGAGTGGAGC
TCGCAATTTC TAGCTAAAGC TCAGCAAGGC TGGGATTGGT TCGCCTTAAG ACTCGATGAC
GGCTCGGCGC TAATGCTGTT TCAACTGAGA GACTCCAGCG GTGACAAGCT GCATTTCTAT
AGCGGTCGGC GCATGTTTCC TGATGGTCGC GGCCACAATA TCACTAATAA GCAGATCTCT
ATGACGGCAA TAGACTGGCA ACAAATGCAA TCAGGCCATT ACCCAACTGC GTGGCAGATT
GCTATTCCGT CAGAAAATAT CCAGCTAACG ACTCAGGCAC TCAATGCTGA TTCCAGCATG
CCTCTGTCTA TCCCCTACTG GGAAGGCCCT ATCAGAATAA GTGGCAGTCA TAGTGGCATG
GGTTACATGG AACTCACCGG CTATTAA
 
Protein sequence
MKLYPCLLLL TLLYGCDSEP NKSPTGMGQR LDGDTTHYTP VVPGKTLSFP TDHMAHDYFR 
QEWWYLTANL TTETGESLGL QWTQFRIALS PPDPDEKAST QDLAQSSWQT QQLYMSHSAI
TTQTQHLAAE RWSRGHPFLA GTQTSPLVIK LDDWQWRSND EQLFPATLSV ATDSFSYQLK
LNSQAPFQLQ GDNGYSRKNA AGTVASYYYS QPFIKVSGTV ERDGKTIQVN GDGWLDREWS
SQFLAKAQQG WDWFALRLDD GSALMLFQLR DSSGDKLHFY SGRRMFPDGR GHNITNKQIS
MTAIDWQQMQ SGHYPTAWQI AIPSENIQLT TQALNADSSM PLSIPYWEGP IRISGSHSGM
GYMELTGY