Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0625 |
Symbol | |
ID | 5661025 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 769086 |
End bp | 770192 |
Gene Length | 1107 bp |
Protein Length | 368 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641235171 |
Product | hypothetical protein |
Protein accession | YP_001500488 |
Protein GI | 157960454 |
COG category | [R] General function prediction only |
COG ID | [COG5621] Predicted secreted hydrolase |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGAAGCTGT ATCCCTGTTT ACTGCTACTT ACCTTACTTT ACGGCTGTGA CTCAGAACCA AACAAGTCAC CTACAGGTAT GGGGCAACGA CTCGATGGAG ACACCACCCA CTACACTCCT GTCGTTCCGG GAAAAACACT CTCCTTCCCA ACTGACCACA TGGCCCATGA CTACTTCAGG CAGGAGTGGT GGTATTTGAC TGCCAATCTA ACAACCGAAA CAGGAGAATC ACTCGGCTTA CAATGGACGC AATTTCGTAT CGCTCTATCC CCTCCAGATC CTGATGAAAA GGCAAGCACA CAAGACTTAG CCCAATCGAG TTGGCAGACA CAGCAGCTTT ATATGTCCCA TAGCGCGATC ACCACACAAA CCCAGCACCT CGCAGCAGAA AGATGGTCTA GAGGCCATCC ATTTCTTGCT GGTACTCAAA CATCGCCGCT GGTGATTAAG CTAGATGATT GGCAATGGCG TAGCAATGAC GAGCAGTTAT TTCCTGCCAC CTTATCCGTA GCTACCGATA GCTTTAGCTA CCAGCTCAAA CTCAATAGTC AGGCTCCCTT TCAGCTTCAA GGCGATAACG GCTATAGCCG AAAAAATGCC GCCGGCACAG TGGCGAGCTA TTATTATAGC CAGCCTTTTA TCAAGGTCAG TGGCACTGTC GAGCGAGATG GCAAAACAAT TCAGGTGAAC GGTGATGGCT GGCTCGATAG AGAGTGGAGC TCGCAATTTC TAGCTAAAGC TCAGCAAGGC TGGGATTGGT TCGCCTTAAG ACTCGATGAC GGCTCGGCGC TAATGCTGTT TCAACTGAGA GACTCCAGCG GTGACAAGCT GCATTTCTAT AGCGGTCGGC GCATGTTTCC TGATGGTCGC GGCCACAATA TCACTAATAA GCAGATCTCT ATGACGGCAA TAGACTGGCA ACAAATGCAA TCAGGCCATT ACCCAACTGC GTGGCAGATT GCTATTCCGT CAGAAAATAT CCAGCTAACG ACTCAGGCAC TCAATGCTGA TTCCAGCATG CCTCTGTCTA TCCCCTACTG GGAAGGCCCT ATCAGAATAA GTGGCAGTCA TAGTGGCATG GGTTACATGG AACTCACCGG CTATTAA
|
Protein sequence | MKLYPCLLLL TLLYGCDSEP NKSPTGMGQR LDGDTTHYTP VVPGKTLSFP TDHMAHDYFR QEWWYLTANL TTETGESLGL QWTQFRIALS PPDPDEKAST QDLAQSSWQT QQLYMSHSAI TTQTQHLAAE RWSRGHPFLA GTQTSPLVIK LDDWQWRSND EQLFPATLSV ATDSFSYQLK LNSQAPFQLQ GDNGYSRKNA AGTVASYYYS QPFIKVSGTV ERDGKTIQVN GDGWLDREWS SQFLAKAQQG WDWFALRLDD GSALMLFQLR DSSGDKLHFY SGRRMFPDGR GHNITNKQIS MTAIDWQQMQ SGHYPTAWQI AIPSENIQLT TQALNADSSM PLSIPYWEGP IRISGSHSGM GYMELTGY
|
| |