| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0623 |
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| Symbol | |
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| ID | 5661023 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 765981 |
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| End bp | 768461 |
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| Gene Length | 2481 bp |
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| Protein Length | 826 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641235169 |
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| Product | nitrate reductase catalytic subunit |
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| Protein accession | YP_001500486 |
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| Protein GI | 157960452 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0243] Anaerobic dehydrogenases, typically selenocysteine-containing |
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| TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence
[TIGR01706] periplasmic nitrate reductase, large subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.729608 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCATTA GCCGTCGCGA GTTTCTAAAA GCCAACGCCG CCGTTGCAGC CGCAACTGCC
GTAGGCGCGA CTCTGCCAGT TAAGATAGTC GAAGCTGCAG AGCAAAAAGA TAACATCAAG
TGGGACAAAG CACCTTGTCG TTTTTGTGGC GTAGGTTGTA GTGTTCTTGT AGGCACAGAT
AATGGCAAAG TCGTCGCCAC CAAAGGTGAC CCTGAAAGCC CTGTGAACAA AGGCCTTAAC
TGTATTAAAG GCTACTTCCT TTCTAAAATC ATGTACGGTA AGGATCGCCT AACCACACCG
CTTCTACGTA TGAAAGACGG CCAATATGAT AAAGAAGGCG AGTTCACCCC AATCAGCTGG
GATAGCGCTT TTGACATCAT GGCTGACAAA TGGAAAAACA CCCTTAAGAC CAAAGGCCCA
ACTGCCATTG GTATGTTTGG CTCTGGCCAG TGGACTGTTT GGGAAGGTTA TGCTGCATCT
AAACTTCACA AAGCCGGTTT CCTAACTAAC AACATCGACC CGAATGCGCG TCACTGTATG
GCATCTGCGG TTGTTGGCTT TATGCGTACC TTTGGTATCG ATGAGCCAAT GGGTTGTTAC
GACGACTTAG AAGCCGCTGA CCAGTTCGTG CTATGGGGCG CGAACATGGC TGAAATGCAC
CCAATCCTTT GGGCTCGCCT ATCGGATCGT CGCCTAAGTA GCCCGACTAG CCGCGTGCAC
GTGTTATCGA CTTTCGAAAA CCGTAGCTTC GACTTAGCCG ACAACGCCAT GGTGTTCCGT
CCACAGTCTG ACTTAGTGAT CCTTAACTAT ATTGCTAACT ACATCATTCA AAACGATGCG
GTTAACAAAG ACTTCGTTAA CGAACATACC ACCTTTGCAC TAGGTACTAC CGATATCGGT
TATGGTCTGC GTCCAGATCA CCCGCTTGAG AAAAAAGCTA AGAACCCAGG TAACGGTAAA
TTCGCACCGA TCAGCTTCGA TGAGTACGCT AAGTTTGTTA GCACATACAC GCTAGAATAC
GCAGCAGAGA TGAGTGGTGT TGAGCCTGAA AAGCTTGAGC TAATGGCTAA GGCTTATGCC
GATCCAAACG TGAAGATGAT GAGTCTGTGG ACCATGGGTA TCAACCAACA CACTCGTGGT
GTTTGGGCCA ACAACATGCT TTACAACATC CACTTGCTAA CCGGTAAAAT TGCCACTCCA
GGCAACAGCC CATTCTCGCT AACGGGTCAA CCATCTGCTT GTGGTACTGC ACGTGAAGTA
GGTACGTTCG CGCACCGCCT ACCAGCAGAC ATGGTAGTCA TGAATCCTAA GCACCGTGCA
ATTGCTGAGA AGTTATGGCA ACTACCAGAA GGTACGATTC CGCCAAAGCC TGGTTTCCAC
GCCGTGCTAC AGAGCCGCAT GCTTAAAGAT GGCAAGCTGA ACTGTTACTG GACTATGTGT
ACCAATAACA TGCAAGCGGG TCCAAACATT AACGATGAAA TGTACCCAGG TTTCCGTAAC
CCAGAAAACT TCATTGTGGT ATCTGATCCC TACCCAACAG TAACCGCTAT GGCTGCTGAC
TTGATTCTAC CAACGGCTAT GTGGGTAGAA AAAGAAGGGG CTTACGGCAA CGCAGAGCGT
CGCACTCACA TGTGGCACCA GCAAGTTAAA GCACCAGAGG GCGCTAAGTC TGACCTATGG
CAGCTTATGG AATTCTCTAA GCGCTTTAAG GTGTCTGAAG TCTGGCCAGC GGAGCTTATT
GCTAAGCAAC CTGAAGTGGC TGACAAGACA TTATTTGATG TGCTTTACGC CAATGGCGTA
GTCAACAAGT TCCCTGCTTC TGATTGCAAA GCTGAATTGA ACGACGAGTC TGATGCATTT
GGTTTCTACG TACAAAAAGG ACTATTTGAA GAATACGCCC AGTTTGGTCG TGGTCACGCT
CACGATTTAG CAGACTTCGA TACTTACCAT GAGACTCGCG GCCTACGCTG GCCGGTAGTT
GATGGTAAAG AAACATTACG TCGCTTCTCG AAAGGCGATC CGTATGTGAA AGGCGACAAG
GAATTTGACT TCTACGGTAA GCCTGACGGT AAAGCGGTGA TTTTCGCCCT ACCATTTGAG
CCTGCAGCAG AAGAGCCAAA TGAAGAATAC GATCTATGGT TATCAACCGG CCGTGTTCTT
GAACATTGGC ACACAGGTTC GATGACAGCT CGCGTACCTG AGCTTTATCG CGCATACCCT
GATGCACAAA TCTTTATGCA CCCAGAAGAT GCTAAAGCAC GTGGTCTAAA GCGTGGCGAT
GAAGTGATTG TGGCTTCGCC TCGCGGTGAA GTAAAAACCC GTGTAGAAAC TAAAGGCCGT
AACAAGCCGC CAAGAGGCGT GGCGTTTATG CCATTCTTCG ATGCGCGCCA GCTGGTCAAC
AAGTTAATAC TAGATGCGAC TGATCCGCTG TCAAAAGAGA CAGACTTCAA GAAGTGTCCA
GTTAAAGTGA TGAAAGCGTA A
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| Protein sequence | MSISRREFLK ANAAVAAATA VGATLPVKIV EAAEQKDNIK WDKAPCRFCG VGCSVLVGTD
NGKVVATKGD PESPVNKGLN CIKGYFLSKI MYGKDRLTTP LLRMKDGQYD KEGEFTPISW
DSAFDIMADK WKNTLKTKGP TAIGMFGSGQ WTVWEGYAAS KLHKAGFLTN NIDPNARHCM
ASAVVGFMRT FGIDEPMGCY DDLEAADQFV LWGANMAEMH PILWARLSDR RLSSPTSRVH
VLSTFENRSF DLADNAMVFR PQSDLVILNY IANYIIQNDA VNKDFVNEHT TFALGTTDIG
YGLRPDHPLE KKAKNPGNGK FAPISFDEYA KFVSTYTLEY AAEMSGVEPE KLELMAKAYA
DPNVKMMSLW TMGINQHTRG VWANNMLYNI HLLTGKIATP GNSPFSLTGQ PSACGTAREV
GTFAHRLPAD MVVMNPKHRA IAEKLWQLPE GTIPPKPGFH AVLQSRMLKD GKLNCYWTMC
TNNMQAGPNI NDEMYPGFRN PENFIVVSDP YPTVTAMAAD LILPTAMWVE KEGAYGNAER
RTHMWHQQVK APEGAKSDLW QLMEFSKRFK VSEVWPAELI AKQPEVADKT LFDVLYANGV
VNKFPASDCK AELNDESDAF GFYVQKGLFE EYAQFGRGHA HDLADFDTYH ETRGLRWPVV
DGKETLRRFS KGDPYVKGDK EFDFYGKPDG KAVIFALPFE PAAEEPNEEY DLWLSTGRVL
EHWHTGSMTA RVPELYRAYP DAQIFMHPED AKARGLKRGD EVIVASPRGE VKTRVETKGR
NKPPRGVAFM PFFDARQLVN KLILDATDPL SKETDFKKCP VKVMKA
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