Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0570 |
Symbol | |
ID | 5660970 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 700446 |
End bp | 701813 |
Gene Length | 1368 bp |
Protein Length | 455 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641235115 |
Product | major facilitator transporter |
Protein accession | YP_001500433 |
Protein GI | 157960399 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.000000142598 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAACC AAGGACTATC CAAGACTGAG AAAAAAGTCG CATTTTCTTT AGCCAGTGTA TTTGGCTTGC GCATGATGGG CTTGTTTATG ATCATGCCTG TGTTTGCACT CTACGGGCAA CACCTCGAAG GTTTCTCACC TTTGTGGGTC GGCATCGCCA TTGGTGCATA TGGCTTAACG CAAGCGGTTC TGCAGATCCC TATGGGGATC TTATCTGATA AGTTTGGCCG TAAGCCGATT ATCCTCATCG GACTGCTTAT TTTTGCCTTA GGTAGCTTAG TCGCCGCGAA TGCTGAAACC ATCTATGACG TCGTGGCTGG ACGAGCACTG CAAGGCATGG GCGCAATTGC CGCCGCCGTT TTAGCACTTG CAGCCGACCT TACCCGTGAT GAGCAGCGTA CCAAGGTGAT GGCCATTATC GGCATGTGTA TCGGTTTTTC ATTTGCACTC TCCCTGCTAG TAGGTCCGAT TGTGGCGCAG CATTTGGGTT TGTCAGGGCT GTTCTTTATG ACGGCCGGAT TGGCATTACT AGGGATGTTG ATAGTACAGC TGTTAGTACC GACCCCGATT TCTCATGCGC CGAAGGGCGA CACAGTGGCT GCGCCAGAAA AGCTTAAACG TATGCTGCTT GATCCACAGC TGTTTAGACT CGATGCGGGT ATCTTCATCT TGCACTTAGT GCTAACCGCG GTATTTGTGG CACTACCGCT AGATCTGGTC GATGCGGGCT TAGCCAAAGA AAAGCACTGG ATGCTCTATT TCCCAGCCTT TATGGGGGCA TTCTTTCTGA TGGTGCCGCT GATTATTATT GGAGTTAAAC GCAATAATAC CAAAGGCATG TTCCAAGTGG CTCTTATCAT CATGATGGCT GCACTGGGTT CTATGGCGAT GTTTGCCGAT AATTTAGTGA TATTGAGCAT TGCCGTAGTA TTGTTCTTTA CTGGCTTTAA TTACTTAGAA GCCTCATTAC CGAGTTTGAT CGCTAAGTTT TGCCCCGTCG GCGACAAAGG CTCTGCAATG GGCGTTTATT CGACCAGTCA ATTTCTAGGT GCATTTTGCG GTGGTTTATT AGGCGGCGGC GCCTATCAAC TCGTGGGCGC ATCGGGTGTA TTTGCAGTGG CATTAGGTCT AATGTGTGTC TGGTTTTTAT TGACCTTTGG CATGAAAAAT CCAGTACTAC TCAAGAGTTA CACATTAGAA GCAAATGTGA CTGACAAACA GAGCGCAGTA AGCATGGCGA CTGAGCTGTC GGCATTAGCG GGCGTGTCAG AAGCTATCGT TGTACTCGAA GAGAAAGTGG CTTATTTAAA AGTAGATGAC CATTTCGATT TGAGAGAAGC CAGAGCTGTG TTACGCTCTG TCGATTAG
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Protein sequence | MANQGLSKTE KKVAFSLASV FGLRMMGLFM IMPVFALYGQ HLEGFSPLWV GIAIGAYGLT QAVLQIPMGI LSDKFGRKPI ILIGLLIFAL GSLVAANAET IYDVVAGRAL QGMGAIAAAV LALAADLTRD EQRTKVMAII GMCIGFSFAL SLLVGPIVAQ HLGLSGLFFM TAGLALLGML IVQLLVPTPI SHAPKGDTVA APEKLKRMLL DPQLFRLDAG IFILHLVLTA VFVALPLDLV DAGLAKEKHW MLYFPAFMGA FFLMVPLIII GVKRNNTKGM FQVALIIMMA ALGSMAMFAD NLVILSIAVV LFFTGFNYLE ASLPSLIAKF CPVGDKGSAM GVYSTSQFLG AFCGGLLGGG AYQLVGASGV FAVALGLMCV WFLLTFGMKN PVLLKSYTLE ANVTDKQSAV SMATELSALA GVSEAIVVLE EKVAYLKVDD HFDLREARAV LRSVD
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