| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0566 |
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| Symbol | |
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| ID | 5660966 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 693864 |
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| End bp | 695735 |
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| Gene Length | 1872 bp |
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| Protein Length | 623 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641235111 |
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| Product | DEAD/DEAH box helicase domain-containing protein |
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| Protein accession | YP_001500429 |
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| Protein GI | 157960395 |
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| COG category | [J] Translation, ribosomal structure and biogenesis
[K] Transcription
[L] Replication, recombination and repair |
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| COG ID | [COG0513] Superfamily II DNA and RNA helicases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 31 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCATCCA ATGAAAAAAC TTTCCGCGAA CTCGGTCTAA CTGAGTCTTT AGTGCGTGCT
CTTGACGATC TTGGTTATGA AAAACCAACA CCAATTCAAG CCGCAAGTAT CGAGCCTCTT
ATGGCGAATA AAGATATTTT AGGTCAAGCG CAAACAGGTA CTGGTAAAAC AGGTGCTTTC
GCACTTCCTT TGCTAAACAG CATTGACCCA AATACTAATG CACCACAAAT TCTAGTACTA
GCACCAACAC GTGAACTTGC AGTTCAGGTT GCTGAAGCAT TCGCTAGCTA CGCAAAATAC
ATGAAAGGCC TACACGTTCT ACCAATTTAC GGTGGACAAA GCATGCAACA GCAGTTGAAT
GCATTGCGTC GTGGCCCTCA AATCATCGTT GGTACTCCAG GCCGTGTTAT GGACCATATG
CGTCGTGGCA CACTAAAGCT TGATACGTTA AAAGCTATGG TACTTGACGA AGCTGACGAA
ATGTTAAAAA TGGGCTTCAT CGATGATATC GAATGGATCC TTGAGCACAC GCCTAAGACT
CGCCAACTAG CACTATTCTC GGCAACTATG CCTGAACAGA TTAAGCGTGT TGCTAACAAA
TATTTAGATA ACCCTGTTCA CGTTAAAATC GCGGCAACAA CTTCTACAGT TGAAACCATC
GAGCAACGTT TTGTTCAGGT TTCTCAGCAC AACAAACTTG AAGCGCTAGT ACGTGTTCTA
GAAGTTGAAA AAACCGAAGG TATTATTATC TTCGTTCGTA CTCGTAACAG CTGTGTTGAG
CTAGCTGAAA AGTTAGAAGC TCGTGGTTAT GCATCATCAC CACTACACGG TGACATGAAC
CAGCAAGCAC GTGAGCGTGC TATTGAGCAA CTTAAGCGTG GCCAACTAGA CATCATTATT
GCTACTGACG TAGCTGCACG TGGCCTTGAC GTTGAGCGTA TTGGACACGT AGTTAACTAC
GATATTCCAT ATGATACAGA AGCTTATGTT CACCGTATTG GTCGTACAGG CCGTGCTGGT
CGTACAGGTA TGGCGATTCT TTTTGTTACA CACCGTGAAA TGCGTATGCT ACGCACTATC
GAGCGTGCGA CTAACAGCCG TATCGCTCCA ATGGACGTGC CAAGCCCTGA GACAGTAACT
GAACGTCGTC TTTCTCGCCT AGGTGAGCAA GTAGCTGAAA TTATCTCTCA AGATCTAGAG
TTCATGAAAG GCGCAGTGGC AACACTTTGT CAGCAATTAG AAGTCGATAC AGACATACTT
GCTGCAGCAC TACTTAAGCA AGTGCAAAAA GATCGTCCAT TGCAACTACA TACAATGAAC
GAACGTCAAC GCGATAGCCG TGATGATCGT AATTCACGTG ACCGTGATGA CCGTGGTTCT
CGTGATCGCA ACGACCGTGG TCCTCGTGAC CGTAGCGACC GTCCACGTCG TGAATCTCGC
CCAACACCTT CAAACCTAGG TGCTGCTGAT TCATTGAAGG ACAATCCAGA TGTTAAAATG
TGCCGTTACA TCATCGATGT AGGTCGTGAT AATGGTGTTG GTGTAGGTAA CATCGTTGGT
GCCGTAGCTA ACGAAGCAAA CATCGATAGC CGTTACATTG GTCAAATCCA ATTGTTCGAC
CAAGTGACTG CAATTGACTT GCCAGATGGC ATGCCAAAAG AAGTTCTACA GCACCTTAAG
AAAGTGCGTG TATGTGGCCG TCCACTAAAC ATCCGTGAAG CTGCTGGCGA AACGTTTGCA
AACACTTCTG GTGGCGATAG CCGTCCTCCA CGTCGCCCAC GCAAGCCTGC TGGTGAACGT
GGTGAGCGTA GTGACCGTCG TCCTTCTGGT GACAGAAAGC CGCACCGTAA AGGTCCAAAA
GACGCAGAAT AA
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| Protein sequence | MSSNEKTFRE LGLTESLVRA LDDLGYEKPT PIQAASIEPL MANKDILGQA QTGTGKTGAF
ALPLLNSIDP NTNAPQILVL APTRELAVQV AEAFASYAKY MKGLHVLPIY GGQSMQQQLN
ALRRGPQIIV GTPGRVMDHM RRGTLKLDTL KAMVLDEADE MLKMGFIDDI EWILEHTPKT
RQLALFSATM PEQIKRVANK YLDNPVHVKI AATTSTVETI EQRFVQVSQH NKLEALVRVL
EVEKTEGIII FVRTRNSCVE LAEKLEARGY ASSPLHGDMN QQARERAIEQ LKRGQLDIII
ATDVAARGLD VERIGHVVNY DIPYDTEAYV HRIGRTGRAG RTGMAILFVT HREMRMLRTI
ERATNSRIAP MDVPSPETVT ERRLSRLGEQ VAEIISQDLE FMKGAVATLC QQLEVDTDIL
AAALLKQVQK DRPLQLHTMN ERQRDSRDDR NSRDRDDRGS RDRNDRGPRD RSDRPRRESR
PTPSNLGAAD SLKDNPDVKM CRYIIDVGRD NGVGVGNIVG AVANEANIDS RYIGQIQLFD
QVTAIDLPDG MPKEVLQHLK KVRVCGRPLN IREAAGETFA NTSGGDSRPP RRPRKPAGER
GERSDRRPSG DRKPHRKGPK DAE
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