Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0562 |
Symbol | metF |
ID | 5660962 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 690542 |
End bp | 691432 |
Gene Length | 891 bp |
Protein Length | 296 aa |
Translation table | 11 |
GC content | 48% |
IMG OID | 641235107 |
Product | 5,10-methylenetetrahydrofolate reductase |
Protein accession | YP_001500425 |
Protein GI | 157960391 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0685] 5,10-methylenetetrahydrofolate reductase |
TIGRFAM ID | [TIGR00676] 5,10-methylenetetrahydrofolate reductase, prokaryotic form |
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Plasmid Coverage information |
Num covering plasmid clones | 35 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGGTTTTC ATCACGCACA ACATGCAACA TCATTAAACC AGAGCCTGTC TGAGCTAAAT GGTGATATTA ACGTTTCTTT CGAATTTTTC CCGCCTTCAA CTCCAGAGAT GGAAAAGTTA CTGTGGAACT CTATCCGTCG TTTAGAGCCA TTAAATCCAA AGTTTGTTTC GGTGACTTAT GGTGCTAACT CGGGTGTTCG TGATAGAACC CATGGCGTAA TTGAGCGTAT CCAGACTGAA ACAGACTTGC TGGCTGCGCC GCACCTGACT TTAGTCGATG CCAGCGATGA AGAGCTTAAA GAGCTGGCAA AACATTATTG GAATAGCGGG ATCCGCGATA TCGTCGCCCT GCGCGGTGAC TTACCAGACG GTAGCCCTAA GCCTACTCGT TTTGCTAATG ATCTTGTCCG CCTATTACGT TCGGTAGCCG ACTTTGATAT CTCGGTGGCA GCCTACCCAG AGGTGCATCC CGATGCGAGT AATGCACAGT CAGATCTGAT TAATCTTAAA AAGAAGATAG ACGCTGGTGC CAACCGCGCT ATCACTCAGT TTTTCTTCGA TGTGGAGTCA TATCTGCGTT TTAGAGACCG CTGCGCGGCT GCAGGAATCG ACGCTGAAAT CATCCCAGGG ATCTTACCTG TGACTAACTT TAATCAGACT AAGCGCTTTG CCGCCATGAC CAATGTGTCC ATCCCAAGCT GGTTACATCG TCAGTTTGAG GGGCTCGAAG ATGATGCCAT TACCCGCCAG ATGGTTGGGG CTAACGTGGC TATCGACATG GTCAAAGTCC TATCTCGTGA AGGAGTGAAA GACTTCCACT TCTATACGTT AAATCGCGCT GAGCTGACCT ATGCCATTTG TCACACATTA GGGGTTAGAC CGGGAAAGTA A
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Protein sequence | MGFHHAQHAT SLNQSLSELN GDINVSFEFF PPSTPEMEKL LWNSIRRLEP LNPKFVSVTY GANSGVRDRT HGVIERIQTE TDLLAAPHLT LVDASDEELK ELAKHYWNSG IRDIVALRGD LPDGSPKPTR FANDLVRLLR SVADFDISVA AYPEVHPDAS NAQSDLINLK KKIDAGANRA ITQFFFDVES YLRFRDRCAA AGIDAEIIPG ILPVTNFNQT KRFAAMTNVS IPSWLHRQFE GLEDDAITRQ MVGANVAIDM VKVLSREGVK DFHFYTLNRA ELTYAICHTL GVRPGK
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