Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0526 |
Symbol | |
ID | 5660926 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 640018 |
End bp | 641220 |
Gene Length | 1203 bp |
Protein Length | 400 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641235064 |
Product | aromatic amino acid transporter |
Protein accession | YP_001500389 |
Protein GI | 157960355 |
COG category | [E] Amino acid transport and metabolism |
COG ID | [COG0814] Amino acid permeases |
TIGRFAM ID | [TIGR00837] aromatic amino acid transport protein |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 0.560578 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAACAAAA GTAAAACCTT CGGCAGTATG CTAATCATTG CTGGTACAAC CATTGGTGCT GGAATGCTGG CATTGCCTCT GGCTGCATCG GGTCTTGGCT TTGGTATGGC TAGCATCATC ATGCTACTGA TTTGGTCACT AATGACCTAT ACCGCGCTGC TTATGATTGA AGTACATCAA CATGCTCCTA TCGATGCGAC CTTGCATACC TTGGCGCATA AGCTACTGGG CCGAAAAGGG CAGCTTATTG CCAGCTTTTC GATGATGTTT CTATTCTACG CACTATGTGC CGCCTACATC GCAGGGGGAG GTGAGCAGAT CCACAGTAAA TTAACTAGCT GGTTTGGACT GGAACTGCCA ATGCAGGCTG GAGCAATCAT TTTTACCCTA TTGATAGGCA CTGTGGTGGC CATCGGTACT CGCTCGGTGG ATCTGATCAA CCGCAGCCTG TTTTCACTTA AGCTGATTGC GTTAGTGGTG ATGCTGTTTC TGCTATTACC CCATGTGTCG GTAGAAAACC TTGTCGAACT GCCTGTTCAT CAAGGTTTAG TATTCGCGTC ACTGCCGGTT ATCTTCACCT CTTTTGGTTT TCATGGCTCT ATTCCATCGG TTGTACGCTA TTTAGGTAAA GATACTAAGG CGTTACGTTG GATTATTGTT GTGGGCTCTG CATTGCCATT GATGGTATAC CTGTTATGGA TGCTAGCTAG CCATGGCGTA TTGCCTCAGG AAGACTTAAT GGGCAGCCAA AGCTTGAATG GCTTTATCGC TTCTCTGAGT AGAATGCTAG ATAACCCAAT GATTGCTAAC GCGGTATCTA TCTTTGCCGA CTTAGCCTTA GCGACTTCTT TCCTTGGGGT GAGCCTAGGT CTATTCGACT TCATCTCAGA TCTACTTAAA CGCAGCACCA AGGCTAGCCA TAGGGTGCAG GTTGGCTTAG TGACCTTCTT ACCTCCGCTA GGCTTTGCTC TGTTCTATCC TCAGGGGTTT ATCACCGCAT TAGGTTACGC AGCTTTTGCC TTGGTTATTC TGGCTGTTTT TCTGCCAGTC GCTATGGTTA CGGCTCAGCG TAAGCAAGTC GGTTTAGAAG GATACAGAGT CAAAGGCGGA AAGGTAGCCT TAGTTGCGGC TGGATTAGCT GGAGTGTTGA TCATTAGTGT GCAACTGATG CAGATGTTTA ATCTACTACC TTCGGTTGGT TGA
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Protein sequence | MNKSKTFGSM LIIAGTTIGA GMLALPLAAS GLGFGMASII MLLIWSLMTY TALLMIEVHQ HAPIDATLHT LAHKLLGRKG QLIASFSMMF LFYALCAAYI AGGGEQIHSK LTSWFGLELP MQAGAIIFTL LIGTVVAIGT RSVDLINRSL FSLKLIALVV MLFLLLPHVS VENLVELPVH QGLVFASLPV IFTSFGFHGS IPSVVRYLGK DTKALRWIIV VGSALPLMVY LLWMLASHGV LPQEDLMGSQ SLNGFIASLS RMLDNPMIAN AVSIFADLAL ATSFLGVSLG LFDFISDLLK RSTKASHRVQ VGLVTFLPPL GFALFYPQGF ITALGYAAFA LVILAVFLPV AMVTAQRKQV GLEGYRVKGG KVALVAAGLA GVLIISVQLM QMFNLLPSVG
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