Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0521 |
Symbol | |
ID | 5660921 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 635435 |
End bp | 636916 |
Gene Length | 1482 bp |
Protein Length | 493 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 641235059 |
Product | UbiD family decarboxylase |
Protein accession | YP_001500384 |
Protein GI | 157960350 |
COG category | [H] Coenzyme transport and metabolism |
COG ID | [COG0043] 3-polyprenyl-4-hydroxybenzoate decarboxylase and related decarboxylases |
TIGRFAM ID | [TIGR00148] UbiD family decarboxylases |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTTTTA AGGATTTACG CAGCTTTATA GACCACTTAG AAACCAATGG TGAGCTTAAG CGTATTAGTC ATCCCGTCGA TCCTCATTTG GAAATGACAG AGATTGCCGA TCGTGTACTA CGCGCCAAAG GTCCAGCTCT GTTATTCGAA AATCCTGTCG GCAACGACAT GCCTGTGCTT GCTAACCTTT TTGGTACCCC AAAACGGGTG GCGATGGCAT TAGGTAAAGA AGATCCCCTC GCGCTACGCG ATGTGGGTGA GCTGCTGGCT TTTTTAAAAG AGCCTGAGCC TCCTCGCGGT TTTAAAGACG CTATCTCAAA AATCCCTATG TTTAAGCAAG CCTTAAACAT GCCGCCAAAG ACAGTGCGTA ACCCACCTTG CCAACAAGTG GTTAAAACCG GTGACGAGGT CGACTTAACT AAATTGCCTA TTCAGCACTG CTGGCCAGGC GATGTGGCGC CGCTTGTCAC TTGGGGATTA ACCATCACCA AGGGCCCACG CCAAAAACGC CAAAACTTGG GTATTTACCG CCAGCAATTA CTCGGTAGAG ACAAGTTAAT TATGCGCTGG CTTGACCATC GCGGCGGCGC ACTAGATTTT AAAGATTTCA AAGAGAAGCA CCCAGGTGAA CGTTATCCAG TAGTCGTGGC ATTAGGCGCC GATCCGGTGA CCATTTTAGG CGCGGTAACG CCAGTGCCGG ATGCCATGAG CGAGTATGCC TTTGCTGGCC TGCTGCGCGG TGAACGCACC GAAGTCTGTA AAGCGTTAAG CTGTGACTTA GAAGTACCCG CCACCAGCGA AATCATCTTA GAAGGTTATA TCGATCCTGA CGAGATGGCT GAAGAAGGCC CGTACGGCGA TCACACAGGT TACTACAACG AAACAGACTC TTTCCCTGTG TTTACGGTGA CGCACATCAC CCACAGAAAA GATGCCATCT ACCACAGCAC CTACACCGGC CGTCCACCAG ATGAGCCAGC CATGCTAGGT GTGGCACTGA ATGAAGTTTT TGTACCAATT CTGCGTAAGC AATACCCTGA GATTATTGAC TTTTACCTGC CGCCTGAAGG CTGCTCGTAC CGTATGGCGG TGATCTCTAT CCGTAAGCAA TATCCAGGAC ATGCCAAGCG GGTGATGATG GGCGCATGGT CTTTCCTACG TCAGTTTATG TACACCAAGT TTATTGTGGT GGTCGACGAG GATGTAAATT GTCGCGACTG GAACGATGTG ATTTGGGCTA TTACCACCCG TATGGATCCT AAGCGTGACA CTGTCATGAT CGAAAACACC CCAATCGATT ATCTCGACTT TGCCTCACCG GTTGCAGGTC TTGGCTCTAA AATGGGTATG GATGCCACTA ACAAATGGGA AGGCGAAACC GATCGTGAAT GGGGTACCCC TATCGTGATG GATGAAGCTG TGAAGCAAAA AGTCGATGCT ATTTGGGATG ACCTAGGCAT TGATGACGCA CCGACCCTAT AA
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Protein sequence | MSFKDLRSFI DHLETNGELK RISHPVDPHL EMTEIADRVL RAKGPALLFE NPVGNDMPVL ANLFGTPKRV AMALGKEDPL ALRDVGELLA FLKEPEPPRG FKDAISKIPM FKQALNMPPK TVRNPPCQQV VKTGDEVDLT KLPIQHCWPG DVAPLVTWGL TITKGPRQKR QNLGIYRQQL LGRDKLIMRW LDHRGGALDF KDFKEKHPGE RYPVVVALGA DPVTILGAVT PVPDAMSEYA FAGLLRGERT EVCKALSCDL EVPATSEIIL EGYIDPDEMA EEGPYGDHTG YYNETDSFPV FTVTHITHRK DAIYHSTYTG RPPDEPAMLG VALNEVFVPI LRKQYPEIID FYLPPEGCSY RMAVISIRKQ YPGHAKRVMM GAWSFLRQFM YTKFIVVVDE DVNCRDWNDV IWAITTRMDP KRDTVMIENT PIDYLDFASP VAGLGSKMGM DATNKWEGET DREWGTPIVM DEAVKQKVDA IWDDLGIDDA PTL
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