| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0506 |
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| Symbol | |
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| ID | 5660906 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 620104 |
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| End bp | 620817 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 641235044 |
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| Product | TPR repeat-containing protein |
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| Protein accession | YP_001500369 |
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| Protein GI | 157960335 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4235] Cytochrome c biogenesis factor |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.979581 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAATAGTT TAGCTATCGG CATTGCTGTC ACCTTATGTG CAGTTATCAC CCTAATTTGG
CGTCATCATC ACTCTAGTCA AAAGCATGGT GTAACCCTGA TAGTTAAGCC TTTCGATGAT
GGAATTGATG AGCACTCTGT CAACATTAAG GTACCTACGG TGCTATCTGT AGTGCTCTTT
ACAACGACAC TATTAATTTA CGTACAATTA GGCCATTTCA ATGGTTGGAA TAAAGGAGTA
GTCGACACAA ATATTGATTA CCTGATCACC GCAGAAATCA ATAGAAATGC AAAAAAAGTC
AATGAACAAC CTAATAATGA AATTGCATTA TTAAATTTGG CTCAATCCTA TGTGGATGGC
GGCCTGTATA GCGAATCGGT TCAAACCTTC GATACCTTAC TCAAGCTCAC GGGCGATGAT
GCCAACATTA TTGGCATGAA AGCTAATGCC ATGTATTACC GCGACAACAG AGAGATGAGT
TTAGACATTG ACTTAGTTAT CGCCAGAGCC TTAGCACTCG ACGAATACGA ACCGCAATCT
CGTTTATTAC TTGCTACCCA CGCTTACCTT AGCGGCGAGT TTGAAAAGGC CATCGAGCAA
TGGCAGAAAC TACTCGAAAG CAAACAGCCA AACGTTAACC GAGCTGCAAT TAATAATGCA
ATTTTAAGAG CCGAGCAAAA AATAGCTAAT CGTTCAGTGG CTGCATCTGA GTAA
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| Protein sequence | MNSLAIGIAV TLCAVITLIW RHHHSSQKHG VTLIVKPFDD GIDEHSVNIK VPTVLSVVLF
TTTLLIYVQL GHFNGWNKGV VDTNIDYLIT AEINRNAKKV NEQPNNEIAL LNLAQSYVDG
GLYSESVQTF DTLLKLTGDD ANIIGMKANA MYYRDNREMS LDIDLVIARA LALDEYEPQS
RLLLATHAYL SGEFEKAIEQ WQKLLESKQP NVNRAAINNA ILRAEQKIAN RSVAASE
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