Gene Spea_0503 details

Gene Information

• Locus tag: Spea_0503
• ID: 5660903
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 616645
• End bp: 618675
• Gene Length: 2031 bp
• Protein Length: 676 aa
• Translation table: 11
• GC content: 45%
• IMG OID: 641235041
• Product: cytochrome c, putative
• Protein accession: YP_001500366
• Protein GI: 157960332

Plasmid Coverage information

• Num covering plasmid clones: 17
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAGACGGT GGAAACACAA GGTAGCATTA AGCGTGCTGT TTTGTTTTGG TGCCATTGCC 
AATGCGAACG CTGCTGGAAA ATACGACAGT ATCCCTCAGA TGGGTAAAAC TGCTAAAGAG 
TCGATAGCTA ATTATCAAGG AACGCAACAG ATAAACGGCG TGAAAACGCT GCAAGACTAT 
ATTGTTCAAG AAGATGAGTT ATTTGATTAC CTATTCGAAA ATCACCCAAT GTTTAAATAT 
CAACAATCGG GTAACTTGAT TGGTGATTAC CATATCAGTG ACCGTGGTGA AGAGTATTTA 
GATACGGGCC ATAGCCCTGC ATATAGTAAA AGTGTTGGTA AGCCACGAGC GGTACAATAT 
CGTTTAGGTG CCAAATCAAT TCTAGATTAT CCAAACAATT TCGTTGGTCC TGAGAAGTGT 
GCCGAATGTC ATGCGACTCA ATACGAGAAA TGGCAGCGCT CGCGTCATGC TAAAACAATT 
CGTTTCCCTG GCGAACACCC AGAAGTGGAT AACGATATTG AAAAAACCAT GTACAACACC 
AAAGATACCT CAATCTTACC CGACGGTATT ACCCCAGACA TGATCTATGC AACTGTTGGT 
ACGCCTCGTA CTAAATACGG TTTCATCGAT GCATGGCTCG TGCGTGGTAC TTACCATATC 
AGAGACGGTT TATTACGCGA CGGCACTGGT AAAATGGTTG CTGGTGCAAA CCAGTTCTCT 
CGTGGTTGGG CTGAATGGCT AACCCCTGAG ATGTCTAAGA AAATTAACGA TGTTATCCCT 
GATTTCCCAA TTACCCTTGA AGGTTTTGGT GGTTCAGGTT CGCACCAGCA AGGCATGAGC 
TCTTATGGTG CTAAGTATGA AAAAGAGATG TTGTTCCAAC CAGCAAGTTC TTACTGTGAA 
GTTTGTCATA CGTTCAAGTT TGACTTCCAA AGCAAGCAAG AGTTCTTCGA TGCCTTAGGC 
GATCCTAAGA AGCTTCAAGA GCACACTATC TCTCGTGGTA TCGCTTGTGA AGAGTGTCAT 
GGCGCAGGTG GTCACTTAGA TGGTGGTACT GGCGGCATGC AGTCTAACTG TGAACGTTGT 
CACCAGCGTT TCCAGTATGA CCCAACGTTA ATGGATACTC CTGAAGCACA AGAGAAGGGT 
GAATACGCCT TTGGTGTGAA GATGAAGTCT CTATGTCCAT CATGTGGTAC TGAAGGTTCA 
CAGATGTATA ACTCTGTGCA CTACGAGAAG GGCATGCGTT GTACTACATG TCACGATCCA 
CACGAAGTGA CGGATGGTTC TTGGCAGTCT GGTTTCACTA CACCAAAGCT GAAGAAAGAC 
TGTAAAGATT GTCACGAAGC ACAAACGTTG ATTGCTGAAA ATTCAGATAC TCACAACCAG 
CAAACATGTC AAAGCTGTCA CATGCCTAAC ATGGGTAGCT GTGAAAACTT CAAGGCATTG 
CAGTTCCCTG ACCAAGCAGG CTTCGACGCA GTACGTAAGT CTCATATGTG GAAGATTGAA 
GTCGACCCTA CTCTGAAGAC GTTGAACCCA CCTGAAGGTG AGTCTCGTGC CGGTGGCCCA 
AGCGGTGTTA AAGGTTGGAC AGTGGCTAAG AACGAAGAAG GTCGCAACTA CTTAGACTTG 
ATGTGGTCTT GTGCTCGTAC CTCTATCTCT GACCACGATG TGGTTGAGAA CAAAGGTTGT 
CACAGCCAGT TCCAGTCTGA ACTAGAAAAA GGCCTACATT ACGAAGATCA GTTAGAGATC 
TACGGTGAAG TTCAGAAGAT GCAAACGCCT GTTAAGGAAG TCTTCACAAA GGTTGAGCAA 
GCACTTGTAC GCATCGACCA GCTATTAGAA GTGACTAAGT TGTCTACTGA AGACAAGACT 
CAAGTACTAA TGCTAGCTGA GAAAGCGCAA GAGACTGTTG ATCTAATCAA GAAAGATGGT 
TCTTGGGGGG TTCATGGCTT CCGTTACAGC CAGAAGCGTC TAGATGCTGC ACTAACGTAT 
GTTACGCAAG CGCAAAACAT TCTAGATGGA ACAGGTTACG CAGCTAAGTA A 

 

Protein sequence

MRRWKHKVAL SVLFCFGAIA NANAAGKYDS IPQMGKTAKE SIANYQGTQQ INGVKTLQDY 
IVQEDELFDY LFENHPMFKY QQSGNLIGDY HISDRGEEYL DTGHSPAYSK SVGKPRAVQY 
RLGAKSILDY PNNFVGPEKC AECHATQYEK WQRSRHAKTI RFPGEHPEVD NDIEKTMYNT 
KDTSILPDGI TPDMIYATVG TPRTKYGFID AWLVRGTYHI RDGLLRDGTG KMVAGANQFS 
RGWAEWLTPE MSKKINDVIP DFPITLEGFG GSGSHQQGMS SYGAKYEKEM LFQPASSYCE 
VCHTFKFDFQ SKQEFFDALG DPKKLQEHTI SRGIACEECH GAGGHLDGGT GGMQSNCERC 
HQRFQYDPTL MDTPEAQEKG EYAFGVKMKS LCPSCGTEGS QMYNSVHYEK GMRCTTCHDP 
HEVTDGSWQS GFTTPKLKKD CKDCHEAQTL IAENSDTHNQ QTCQSCHMPN MGSCENFKAL 
QFPDQAGFDA VRKSHMWKIE VDPTLKTLNP PEGESRAGGP SGVKGWTVAK NEEGRNYLDL 
MWSCARTSIS DHDVVENKGC HSQFQSELEK GLHYEDQLEI YGEVQKMQTP VKEVFTKVEQ 
ALVRIDQLLE VTKLSTEDKT QVLMLAEKAQ ETVDLIKKDG SWGVHGFRYS QKRLDAALTY 
VTQAQNILDG TGYAAK