Gene Spea_0479 details

Gene Information

• Locus tag: Spea_0479
• ID: 5660879
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Shewanella pealeana ATCC 700345
• Kingdom: Bacteria
• Replicon accession: NC_009901
• Strand: +
• Start bp: 590051
• End bp: 592087
• Gene Length: 2037 bp
• Protein Length: 678 aa
• Translation table: 11
• GC content: 46%
• IMG OID: 641235017
• Product: cytochrome c, putative
• Protein accession: YP_001500342
• Protein GI: 157960308

Plasmid Coverage information

• Num covering plasmid clones: 26
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGAAAAGTT GGAAACTTAA AGCAGTCGCG AGTGTACTGT TTTGTTTCGG CGCAATAGGT 
AACGCTAGTG CTGCTGGTGA TAAGTACAAT AGCATCCCAG AAATGGGTGC ATCTGCTAAG 
AATGCAATTG CAAACTATGC TGGTACAGAA GAAAGAACAG GTGTTAAATC GCTACACGAT 
TATATTGTTC AAGAAGATGA GTTGTTTGAT TTCTTATTTC AAAACCATCC AATGTTCAAA 
TATCAAGAAG AAGGTAACTT AATTGGTGAT TACCATATTA GTGACCGTGG TGAAGAATAT 
TTAGATACTG GCGGAAGCCA GGCATACAGT AAGCGTGTAG GTCGTCCAAG TGCAGTTCAG 
TACCGTCTAG GTGCTAAATC AACGTTGGAT TTCCCAAACA ATTTCGTAGG TCCAGAGAAG 
TGTGGTGAGT GTCACGCGAC TCAGTTTGAG AAATGGCAAC GTTCGCGCCA CGCAAACGTA 
GTGCGTTTCC CAAGCGAAAT TACCGATAAA GAAGTACCAA ATGGCGATTT GAATGCAAAG 
CTATACGGTA GTGATGCATC AATGCTTCCA GACGGTATTC GTGCTAACGA CGTGTACGCC 
ATTATTGGTA CACCACGTAC TAAGTACGGT TTCCTAGATT CATGGTTGGT TCGTGGTACT 
TACCACGTTC GTGACGGTTT GTTATCTGAA GGTACAGGCA AGATGGTTGC CGGTGCTAAC 
CAGTTCTCTC GTGGTTGGGC TGAATGGCTA ACTCCAGAGA TGGCGAAGAA GATTAACAAA 
GCAATTCCAG AGTTCCCAGT AACGCTAGAA GAGTTTGGCG CTACAGGTTC TCACCAGTGG 
GGTATGACTT CATACGGTGC TAAGTACGAG AAAGAGATGC TTTTCCAACC TGGTAGCTCT 
TACTGTGAAA TGTGCCACAC GTATAAGTTT GACTTCCAAA ACAAGCAAGA GTTCTTCGAT 
GCACTTGGCG ACGCTAAGAA GCTACAAGAG CACACTATCT CTAAGGGTAT CTCTTGTGAA 
GAGTGTCATG GCGCGGGCGG TCACTTAGAT GGCGGTACTG GCGGCATGCA GTCTAACTGT 
GAACGTTGTC ACCAGCGTTT CTTCTTCGTT GATGCACTAG CTGATACAGA GCAAGCGCAA 
GAGAAGATGG AATACGCATT TGGCGTATAC ATGAAGTCTG CTTGTCCATC TTGTGGTACT 
GAAGGTTCAC AAATGTTTGC TTCTTCTCAT TACGAGAAAG GTATGCGTTG TACAACTTGT 
CACGATCCAC ACGAAGTGAC TGATGGCGAC TTCCTATCAG GTTTCTCTAA GCCAATGCTG 
AAGAAAGACT GTGTTGATTG TCACGAAGCG CAAGCGATGA TCGCTGACAA CACAGACACA 
CACAGCAACC AAACGTGTCA AAGCTGTCAC ATGCCTAACA TGGGTAGCTG TGAAAACTTC 
GCTGCGATTC AGTTCCCTGA TAGCGCAGGT TTCGACGCGG TACGTCGTTC ACACATGTGG 
AAGATTGATA TCGACCCAGA GCGTAAGACA TTGAACCCTC CTGAAGGTCA ACCACGTGAT 
TCAGGCGTGA AAGGCTGGAC TGTGGCTAAG AACGAAGAAG GTCATAACTA CTTAGACTTA 
ATGTGGACTT GTGCTCGTAC AGCGATTTCT GACAAAGACG TAGTGGATAA CAAGGGTTGT 
CACAGCCCAT TCCAGTCTGA GCTAGAAACT GGCCTACATT ACGACGACCA GCTAGAGATC 
TACGGCGAAG TGATGAAGAT GCAAACGCCT GTTAAAGACG TTTACGCCAA AGTTGAACAA 
GCTCTTGAGC GCATCGATAC GCTACTAGAA GTGACTAAGC TGTCTACTGC AGACAAGACT 
GAAGTGCTAA TGCTAGCTGA GAAAGCGCAA GAAACTATCG ACCTAATCAA GAAAGATGGT 
TCATGGGGTG TTCATGGCTT CCGTTACAGC CAGAAGCGTC TAGACGCAGC CCTAACTTAT 
GTTACCCAAG CTCAGAACAT TCTAGACGGT GTTGGTTACA GCGCTAAAAA GATGTAA 

 

Protein sequence

MKSWKLKAVA SVLFCFGAIG NASAAGDKYN SIPEMGASAK NAIANYAGTE ERTGVKSLHD 
YIVQEDELFD FLFQNHPMFK YQEEGNLIGD YHISDRGEEY LDTGGSQAYS KRVGRPSAVQ 
YRLGAKSTLD FPNNFVGPEK CGECHATQFE KWQRSRHANV VRFPSEITDK EVPNGDLNAK 
LYGSDASMLP DGIRANDVYA IIGTPRTKYG FLDSWLVRGT YHVRDGLLSE GTGKMVAGAN 
QFSRGWAEWL TPEMAKKINK AIPEFPVTLE EFGATGSHQW GMTSYGAKYE KEMLFQPGSS 
YCEMCHTYKF DFQNKQEFFD ALGDAKKLQE HTISKGISCE ECHGAGGHLD GGTGGMQSNC 
ERCHQRFFFV DALADTEQAQ EKMEYAFGVY MKSACPSCGT EGSQMFASSH YEKGMRCTTC 
HDPHEVTDGD FLSGFSKPML KKDCVDCHEA QAMIADNTDT HSNQTCQSCH MPNMGSCENF 
AAIQFPDSAG FDAVRRSHMW KIDIDPERKT LNPPEGQPRD SGVKGWTVAK NEEGHNYLDL 
MWTCARTAIS DKDVVDNKGC HSPFQSELET GLHYDDQLEI YGEVMKMQTP VKDVYAKVEQ 
ALERIDTLLE VTKLSTADKT EVLMLAEKAQ ETIDLIKKDG SWGVHGFRYS QKRLDAALTY 
VTQAQNILDG VGYSAKKM