Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0420 |
Symbol | aceF |
ID | 5660820 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 514693 |
End bp | 516555 |
Gene Length | 1863 bp |
Protein Length | 620 aa |
Translation table | 11 |
GC content | 47% |
IMG OID | 641234957 |
Product | dihydrolipoamide acetyltransferase |
Protein accession | YP_001500283 |
Protein GI | 157960249 |
COG category | [C] Energy production and conversion [I] Lipid transport and metabolism |
COG ID | [COG0508] Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide acyltransferase (E2) component, and related enzymes [COG0511] Biotin carboxyl carrier protein |
TIGRFAM ID | [TIGR01348] pyruvate dehydrogenase complex dihydrolipoamide acetyltransferase, long form |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.0458953 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACAATCG AAATTAATGT ACCAGATATC GGTGCGGATG AGGTTGAAGT AACAGAGATC CTTGTTAGCG TAGGCGACAA GGTTGAAGAA GAGCAATCGC TTATCTCTGT TGAAGGCGAT AAAGCTGCGA TGGAAGTTCC GGCTTCTGCA GCGGGTATTG TTAAAGAAAT TAAAGTAGTA GTAGGTGATA AAGTGTCTAC CGATTCATTG ATTATGATCT TTGAATCTGA AGGCGCAGCG TCTGCTCCAG CAGCTGTCGA GGCTGCACCT GTTGCGGCTC CTGCTGCACC AGCTGCGGCA GCTGCGGCAG AGCTAAAAGA AGTTCACGTC CCAGATATTG GTGACGACGA AGTTGAAGTG ACTGAAATTT TAGTGACTGT TGGCGACAGC ATCACTGAAG AGCAATCGCT AATGAGCGTT GAAGGTGACA AAGCTTCTAT GGAAGTACCT GCACCATTCG CTGGTGTGCT GAAAGAGATA AAAGTGAACC TTGGTGACAA GGTTTCTACA GGTAGCCTAG TGATGGTATT TGAAGTAGCT GGTTCTGCAG CGGCTCAAGC ACCTGCTGCG GCAGCCGTTG CTGCTCAAGT AGCATCTGCG CCATCAGTGC AAGATGTCAA CGTACCAGAT ATTGGCGGTG ATGAAGTTGA AGTGACTGAA ATCATGGTTA AAGTTGGCGA CACTGTTACC GAAGAGCAAT CACTTATCAG CGTTGAAGGT GATAAGGCTG CGATGGAAGT GCCTGCACCG TTTGCTGGTA AAGTGTTAGA CATTAAAGTG GCTCAAGGCG ATAAAGTATC GACAGGCTCT TTGATTATGA CTTTTGAAGT TGCAGGTAGC GCACCTGTTG CTGCACCTGC ACAAGTTGCA GCGCCAACAG TTGCTCCTAC TGCGAGCCAA GCACCAGCAG CGAAAGAAGA TTTTGTAGAG AATCATGCAT ACGCTCATGC TTCACCGGTT ATCCGCCGTA TGGCACGTGA ACTAGGCGTT AACCTAGCTA ACGTTAAGGG TACAGGTCGT AAGAACCGTA TCATTAAAGA AGATGTTCAA AACTACATCA AAGCGGTGAT TAAGCAAGTT GAGTCAGGCG CAGTTAAAAC AGCCGCTGCT GGTGGCGAGC TAAACCTACT TGCATGGCCA AAAGTGGACT TCAGCAAGTT TGGTGAAACA GAAGTTAAAC CGTTATCACG TATTCAGAAG ATTTCTGGTG CTAATCTACA CCGTAACTGG GTGAAGATCC CGCATGTTAC CCAGTGGGAT GACGCAGATA TCACTGAACT AGAAGCTTTC CGTAAGGCGC AAAATGCTGC CGAAGCGAAG AAAGACTCTG GCATGAAGAT TACGCCGCTT GTGTTCATCA TGAAGGCTGT TGCTAAAGCG CTAGAAGCGT TCCCAACCTT TAACTCTTCA CTGTCAGAAG ACGGCGAAAG CTTAATTTTG AAGAAGTACG TTAACGTAGG TATTGCAGTA GATACACCAA ACGGTTTAGT TGTTCCTGTG TTTAAAGACG TGAACAAGAA AGGCATTCAT GAGCTTTCTG ATGAGCTGAA AGAGATCTCT AAGAAAGCCC GTGGTGGTAA GTTAACTGCT GCAGATATGC AAGGCGGTTG CTTCACTATC TCTAGCTTAG GTGGCATCGG CGGTACGGCA TTTACGCCAA TCGTTAACGC ACCAGAAGTG GCTATTCTTG GTGTGTCTAA GTCAGACATG AAGCCTGTTT GGAATGGTAA AGAGTTTGAG CCGCGCTTAA TGTTGCCGCT ATCACTGTCT TATGATCATC GAGTGATTGA TGGTGCCGAT GGTGCGCGCT TTATCACGTA CTTGAATAAC TGCTTGTCAG ACATTCGTAC CTTAGTGCTA TAA
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Protein sequence | MTIEINVPDI GADEVEVTEI LVSVGDKVEE EQSLISVEGD KAAMEVPASA AGIVKEIKVV VGDKVSTDSL IMIFESEGAA SAPAAVEAAP VAAPAAPAAA AAAELKEVHV PDIGDDEVEV TEILVTVGDS ITEEQSLMSV EGDKASMEVP APFAGVLKEI KVNLGDKVST GSLVMVFEVA GSAAAQAPAA AAVAAQVASA PSVQDVNVPD IGGDEVEVTE IMVKVGDTVT EEQSLISVEG DKAAMEVPAP FAGKVLDIKV AQGDKVSTGS LIMTFEVAGS APVAAPAQVA APTVAPTASQ APAAKEDFVE NHAYAHASPV IRRMARELGV NLANVKGTGR KNRIIKEDVQ NYIKAVIKQV ESGAVKTAAA GGELNLLAWP KVDFSKFGET EVKPLSRIQK ISGANLHRNW VKIPHVTQWD DADITELEAF RKAQNAAEAK KDSGMKITPL VFIMKAVAKA LEAFPTFNSS LSEDGESLIL KKYVNVGIAV DTPNGLVVPV FKDVNKKGIH ELSDELKEIS KKARGGKLTA ADMQGGCFTI SSLGGIGGTA FTPIVNAPEV AILGVSKSDM KPVWNGKEFE PRLMLPLSLS YDHRVIDGAD GARFITYLNN CLSDIRTLVL
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