| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0412 |
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| Symbol | |
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| ID | 5660812 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 503951 |
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| End bp | 505219 |
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| Gene Length | 1269 bp |
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| Protein Length | 422 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641234949 |
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| Product | type II secretion system protein |
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| Protein accession | YP_001500275 |
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| Protein GI | 157960241 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1459] Type II secretory pathway, component PulF |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 36 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGACGG CAACAATTAA ACCTAAAAAG ACTCGCGCCA AGAAAACGAA AAACCAATCA
AAAGTCCTCA CCTTCGAGTG GAAAGGCACC AATCGAGATG GCACAAAAAC TTCTGGTGAA
CTCAGGGGCG TCTCTAGCGC AGAAATACGC GCTCAATTAA AGAGCCAAGG GGTAAACCCT
AAGTCAGTAA AAAAACAATC TGCTCCCCTG TTTAAACTAG GGGACGCCAA AATTAAACCC
ATGGATATAG CCATGGTCAC TCGTCAGATA GCGACCATGC TTGCGGCAGG CGTGCCTCTA
GTCACCACAA TAGAGCTGCT TGGCCGTGGT CATGAAAAAG CCAAGATGCG AGAACTGTTA
GCAACTATTC TTGCCGAGAT TCAATCTGGT ATTCCATTAT CTGATGCGCT CAGACCTCAC
AGACAATATT TCGATGATCT CTATGTGGAT CTTGTTGCAG CAGGCGAACA CTCAGGATCC
CTCGATACCG TATTTGATCG TATAGCGACC TATAGAGAAA AATCAGAAGC TCTAAAGTCG
AAAATTAAGA AGGCGATGTT CTACCCAGCA GCCGTTGTTA TCGTTGCTAT CTTGGTTACC
TCTCTTTTAT TACTGTTCGT CGTGCCGCAG TTTGAAGAGA TTTTTAAAGG CTTTGGCGCT
GAGCTTCCAC CTTTTACCCA ATTCGTATTG AAAATTTCAA GGGGGCTTGA ACACTCTTGG
TATTTTTTTG TACTTGCTAT TGGTCTAGCT ATCTTTGCCT TTAAGAAAGC GCATCTAGGC
TCGCAACACT TTAGAGATCA GGTTGACACC TTTGTTTTAA AAATCCCCGC CATTGGCCCC
ATTCTGCATA AAGGTGCCAT GGCCCGCTTC GCTCGCACAT TAGCAACTAC CTTTGCCGCT
GGTGTTCCCT TAATCGATGG CCTAGAGTCC GCAGCGGGCG CATCGGGTAA CGCAGTGTAT
CGTAAGGCCA TATTTAAAAT CCGCACCGAA GTGATGTCGG GAATGCAGAT GAATGTAGCC
ATGCGCACCA CGGGACTGTT TCCCGATATG CTGATCCAGA TGGTGATGAT CGGCGAAGAG
TCGGGCTCAC TCGATAATAT GCTCAATAAA GTGGCAAACA TTTATGAGAT GCAGGTGGAT
GATGCCGTAG ATGGCTTATC AAGTCTGATA GAACCGATTA TGATGGTGGT TATCGGCACC
GTGGTTGGTG GTCTAATTGT CGCCATGTAC TTACCCATCT TCCAGATGGG TAAAGTTGTA
GGCGGTTAA
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| Protein sequence | MATATIKPKK TRAKKTKNQS KVLTFEWKGT NRDGTKTSGE LRGVSSAEIR AQLKSQGVNP
KSVKKQSAPL FKLGDAKIKP MDIAMVTRQI ATMLAAGVPL VTTIELLGRG HEKAKMRELL
ATILAEIQSG IPLSDALRPH RQYFDDLYVD LVAAGEHSGS LDTVFDRIAT YREKSEALKS
KIKKAMFYPA AVVIVAILVT SLLLLFVVPQ FEEIFKGFGA ELPPFTQFVL KISRGLEHSW
YFFVLAIGLA IFAFKKAHLG SQHFRDQVDT FVLKIPAIGP ILHKGAMARF ARTLATTFAA
GVPLIDGLES AAGASGNAVY RKAIFKIRTE VMSGMQMNVA MRTTGLFPDM LIQMVMIGEE
SGSLDNMLNK VANIYEMQVD DAVDGLSSLI EPIMMVVIGT VVGGLIVAMY LPIFQMGKVV
GG
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