| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0411 |
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| Symbol | |
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| ID | 5660811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 503007 |
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| End bp | 503918 |
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| Gene Length | 912 bp |
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| Protein Length | 303 aa |
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| Translation table | 11 |
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| GC content | 46% |
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| IMG OID | 641234948 |
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| Product | prepilin peptidase |
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| Protein accession | YP_001500274 |
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| Protein GI | 157960240 |
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| COG category | [N] Cell motility
[O] Posttranslational modification, protein turnover, chaperones
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1989] Type II secretory pathway, prepilin signal peptidase PulO and related peptidases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 37 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACTGAAC TAATTTCTGT TTTTAGCCAG AATCCTTGGC TTTTTATCGC GTTAAGCTTT
GTGTTTGCTG CTGTTATCGG TAGCTTTTTA AACGTGGTGA TCCACCGTAT GCCGGTGATG
ATGAAACGTG AATGGCAGCA AGAGTGTAAT CACTACCTGA GTGAATACAA AAAGCAGGTG
TTCGATAGTA ATAAACAGCA ACTTGAAGCG CCAATTGATG CGTTTCCTAT AAAATACAAC
CTAGTCGTTC CCGGTTCTGC CTGCCCTAAA TGTAAAACCA ATATCAAGGC TATTCATAAC
CTGCCAATGC TTGGCTGGTT GATGCTAAGA GGCAAGTGCG CAGCATGTAG TAACCCGATT
TCGGCTCGCT ACCCTATTGT CGAGTTTATC ACTGCCGGCT TAGTCGCTTT CTTAGCCTGG
CATTTTGGCC CAACTTTAGA GTTTGCTCTA ACCGCTTTAC TGACTTTTTG TCTTATCGCC
TTAACAGGCA TAGATCTAGA CGAGATGCTA TTACCCGACC AAATTACCTT GCCCCTGTTA
TGGCTGGGGC TGATCATTAA CTTAGGCGGC ACCTTTGCAA CAACATCCGA TGCCTTAATT
GGCGCCGCAG CCGGTTACCT AAGTTTATGG TGCGTGTTCT GGCTGTTTAA ACTGCTTACT
GGCAAGGATG GTATGGGCTA TGGCGACTTT AAGTTACTAG CCGTATTTGG CGCCTGGTTC
GGCTGGCAAG TACTGCCTCT TGTTATCTTA CTTTCATCGC TCGTAGGCGC AGTAGTGGGT
ATAGCACTTA TTGTGTTCAA GAAATTAAAC CATGGCAACC CAATTCCATT TGGACCTTAC
ATCGCTGCTG CAGGCTGGAT AGCCATGATC TGGGGCGAGA GCATTACCAA CTGGTATCTG
TCCACTTTAT AA
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| Protein sequence | MTELISVFSQ NPWLFIALSF VFAAVIGSFL NVVIHRMPVM MKREWQQECN HYLSEYKKQV
FDSNKQQLEA PIDAFPIKYN LVVPGSACPK CKTNIKAIHN LPMLGWLMLR GKCAACSNPI
SARYPIVEFI TAGLVAFLAW HFGPTLEFAL TALLTFCLIA LTGIDLDEML LPDQITLPLL
WLGLIINLGG TFATTSDALI GAAAGYLSLW CVFWLFKLLT GKDGMGYGDF KLLAVFGAWF
GWQVLPLVIL LSSLVGAVVG IALIVFKKLN HGNPIPFGPY IAAAGWIAMI WGESITNWYL
STL
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