| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0373 |
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| Symbol | hemC |
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| ID | 5660773 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 452118 |
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| End bp | 453050 |
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| Gene Length | 933 bp |
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| Protein Length | 310 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641234907 |
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| Product | porphobilinogen deaminase |
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| Protein accession | YP_001500236 |
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| Protein GI | 157960202 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0181] Porphobilinogen deaminase |
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| TIGRFAM ID | [TIGR00212] porphobilinogen deaminase |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTCTCAAA ATCTGATCCG TATCGCAACA CGTAAGAGCC CTCTTGCCAT GTGGCAAGCC
GAATTTGTGA AAGCTGAACT GGAAAAAATC CATGAAGGTC TCACTGTAGA ATTGCTACCA
ATGAGCACTA AAGGTGACAT CATCTTAGAC ACGCCACTTG CTAAAGTGGG CGGTAAAGGC
TTATTCGTTA AAGAACTCGA AGTGGCCATG TTAGAAGGCC TGGCAGATAT CGCTGTTCAC
TCGATGAAAG ACGTACCAGT AGACTTCCCA GAAGGTCTAG GTCTTGAAGT GATTTGTGAG
CGTGAAGATC CGCGCGATGC TTTCGTATCA AATACCTATA AGACAATTGA AGATTTGCCA
CAAGGCGCAG TAGTCGGTAC ATCTAGCCTA CGTCGTCAGT GCCAAATTCG CGCTGCGCGT
CCAGATCTAG TTATCAAAGA TCTGCGTGGT AACGTCGGGA CTCGTCTAGC AAAACTAGAT
GCTGGCAACT ATGACGCAAT TATCCTTGCT GCCGCAGGTC TTAAACGCCT TAAGCTAGAA
GAAAGAATCG CAAGCTTCAT CTCAGCAGAG CAATCACTAC CAGCAAACGG CCAAGGCGCT
GTAGGTATTG AGTGTCGTAC TGATGACGCT CGTGTTAAAG CCCTGCTTGC ACCGCTTGAG
CACGCTGAAA CTCGTATGCG TGTTACCGCT GAGCGTGCAA TGAATACTCG CCTTGAAGGT
GGTTGTCAGG TACCTATTGG TGCTTACGCT GAAATCGACG GTGACACATT AAGCCTACGC
GGTTTAGTAG GTAACCCAGA TGGTAGCCAA ATCATCACGG CTTCATCGTC AGGCAGCACT
GCCGATGCAG AGAAGCTAGG CGTTGCACTA GCAGAAGAAC TGCTAAGCAA AGGTGCTAAA
ACGATTCTTG ACGCTGTTTA CGCGAACGCG TAA
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| Protein sequence | MSQNLIRIAT RKSPLAMWQA EFVKAELEKI HEGLTVELLP MSTKGDIILD TPLAKVGGKG
LFVKELEVAM LEGLADIAVH SMKDVPVDFP EGLGLEVICE REDPRDAFVS NTYKTIEDLP
QGAVVGTSSL RRQCQIRAAR PDLVIKDLRG NVGTRLAKLD AGNYDAIILA AAGLKRLKLE
ERIASFISAE QSLPANGQGA VGIECRTDDA RVKALLAPLE HAETRMRVTA ERAMNTRLEG
GCQVPIGAYA EIDGDTLSLR GLVGNPDGSQ IITASSSGST ADAEKLGVAL AEELLSKGAK
TILDAVYANA
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