| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0351 |
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| Symbol | |
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| ID | 5660751 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 399637 |
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| End bp | 401622 |
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| Gene Length | 1986 bp |
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| Protein Length | 661 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 641234881 |
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| Product | TonB-dependent copper receptor |
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| Protein accession | YP_001500214 |
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| Protein GI | 157960180 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG1629] Outer membrane receptor proteins, mostly Fe transport |
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| TIGRFAM ID | [TIGR01778] TonB-dependent copper receptor |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAACAAGA AAACAATGCT GACCATTCCT GTGGTCACCT TAGGGCTGAT TTCAATCCCA
GCTTTCGCCG AAACTATTCA AAAAAATAAC GATTCAGAGC CTGTTGAACG CATTATCGTC
ACCGGCGAGT TGATGAAGGA TCCGACCAAG ACCTATACCG ATCCTAAAAA GCCACGCCTT
CCATTACCCG CCTATGATGG TGCAGGGTTC CTTAAAACCA TTCCTGGTTT TAGTATCGGC
CGTAAAGGCG GCGCCGGTGG CGACCCAAGT CTGCGCGGTC TAGGCGGTTC ACGCCTTAGC
ATTGTCGACG ATGGTCAGCA TGTTTATGGC ACTTGCGGCG GCCGTATGGA TCCACCAACC
GCCTATATCT ATCCTGAGGC CTATGACAAC ATCACCGTCA TCAAGGGCCC ACAAACGGTG
AAATATGGCC CGGTCGGCAG TGCTGGCACC GTGTTGTTCG AAAAAGATCG CCATAGTTTC
GATGAGCCGG GATTAGATGG CCGCGCCAGT ATGACGGCGG GCAGCTTTGG CCGCACCGAT
TACTTAGTCG AGCTAAAAGC TGGCGATGAG AAGCATTACT TCGATATGGA CGTCAATCAA
TCATCGAGCG ACCATTACAA AGATGGTGAT GGTAACGAGG TGCAATCGAG CTACGACCGC
TCTAACTATA ACTTTGCCCT AGGCTGGACA CCAAGTGAAG CAACGGTACT CGAGCTAGCT
TACGGCAGCT CTTCTGGTGA GGCGGAATAT GCCGATCGCG CCAATAAAGC CCGTGAGATC
AACAACGAAA ATCTGACCTT TCTGCTGCAA CATGAATTTG ATAGTGAGTG GCTAAACAGC
ATCGAGCTGC AGGCCTACAG CAACGAGAAC GATCACATAA TGGATCAGTT CGACCAAGGC
GTAAACTCGG GTACCAACGT TAGACGTGGC ACCCAAGGCG GCCACCTTTG GGCTGACTTT
ACCTTAGCCA CTGACTGGAC ATTAACCGCG GGGGCTGACT ACATGGATAG CACCCATGAA
GGTCGCAGCA TCAACCCTGC CATCGATAAC GGTTTAGACG ATCTGCTGAA CAAACCATTT
AAAGACAACA TGCGTTACCA AGCCTCAGGG CTATTTTTAG AGTCCACTTA CAACCTCTCA
AGCGGTAAGT TAATTGCTGG TGCCCGTTAT GATCATTGGA AAACCGAACT CATGGTCGGC
CAAAAAGGCG AGCGCAGCGA TGATCTATTC AGTGGTTACG GCCGCTACGA ACTCACCTCT
GGCAACAGCC AATACTATGC CGGTGTCGGC CACGCTCAGC GAATGCCAGA CTATTGGGAG
ATCATGAAGT CTGATGTGAA TAATCCAAGC CAAAAGGCAT TCGACTTAGC GCCAGAGAAG
ACCACTCAGC TGGATATCGG TTGGATCTAT GAAGCCGATA TTGCCATCTC GACTTCGCTA
TTCTATGGTG AGATCCGCGA CTATATCTTG ATTGATGCTA ATCAGGGGCC AGCGACTACA
GCCTATAACA TCGACGCCAC CGTCTACGGC GGCGAGATCG CGGCTACAAT CCCGCTGACG
GAGCATTTCT CCAGCCAAAC CAGCGTTAGC TATAGTCACG GTGACAATGA TACTGCAGGC
ACGCCACTAG GCCAGATCCC ACCACTAGAG GGACGCATCA CCCTAGATTA CCAATATAAC
CAGTGGACTG CGGGTCTACT TTGGCGCCTA GTAGCCGCTC AAGATAGAGT CGCGATTGGC
GAAGGTAACA TCTCAGGCCA AGATTTAGCC GAAAGCAGCG GTTTCGGCAC CCTTTCTTTC
AACGCGAGCT GGAAGCATAA CGAAGCAGTT TTAGTCAGCT TCGGGGTAGA GAACCTGTTC
GATATCACTT ATGCCGAGCA TATTAGCCGC TCTGGTGCCG GTAACGACAT TCCTGGTAGC
TCTCCTATGT TCCAAGTCAA CGAACCGGGC CGCACCGCTT GGGTTAAAGT GGATTACACT
TTCTAA
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| Protein sequence | MNKKTMLTIP VVTLGLISIP AFAETIQKNN DSEPVERIIV TGELMKDPTK TYTDPKKPRL
PLPAYDGAGF LKTIPGFSIG RKGGAGGDPS LRGLGGSRLS IVDDGQHVYG TCGGRMDPPT
AYIYPEAYDN ITVIKGPQTV KYGPVGSAGT VLFEKDRHSF DEPGLDGRAS MTAGSFGRTD
YLVELKAGDE KHYFDMDVNQ SSSDHYKDGD GNEVQSSYDR SNYNFALGWT PSEATVLELA
YGSSSGEAEY ADRANKAREI NNENLTFLLQ HEFDSEWLNS IELQAYSNEN DHIMDQFDQG
VNSGTNVRRG TQGGHLWADF TLATDWTLTA GADYMDSTHE GRSINPAIDN GLDDLLNKPF
KDNMRYQASG LFLESTYNLS SGKLIAGARY DHWKTELMVG QKGERSDDLF SGYGRYELTS
GNSQYYAGVG HAQRMPDYWE IMKSDVNNPS QKAFDLAPEK TTQLDIGWIY EADIAISTSL
FYGEIRDYIL IDANQGPATT AYNIDATVYG GEIAATIPLT EHFSSQTSVS YSHGDNDTAG
TPLGQIPPLE GRITLDYQYN QWTAGLLWRL VAAQDRVAIG EGNISGQDLA ESSGFGTLSF
NASWKHNEAV LVSFGVENLF DITYAEHISR SGAGNDIPGS SPMFQVNEPG RTAWVKVDYT
F
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