Gene Spea_0231 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0231 
Symbol 
ID5660631 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp259924 
End bp261294 
Gene Length1371 bp 
Protein Length456 aa 
Translation table11 
GC content46% 
IMG OID641234760 
Productargininosuccinate lyase 
Protein accessionYP_001500094 
Protein GI157960060 
COG category[E] Amino acid transport and metabolism 
COG ID[COG0165] Argininosuccinate lyase 
TIGRFAM ID[TIGR00838] argininosuccinate lyase 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCATTAT GGGGCGGCAG ATTTAGCCAA GAGAGCAGTG CACTGTTTAA ACTTTTCAAT 
GACTCATTAC CTGTGGACTT TCGACTCATA GAGCAAGACA TTGTCGGCTC AATTGCATGG
GCAAGTGCCA TTACCCAGGT TGGGATCCTT ACCGAGAAAG AATGCACCGA GCTACACCAA
GCGTTAAATG AACTACTCGC GGAAACGCAA GATAGTCCTG AACTTATCAT TGCTTCAGGA
GCTGAGGATA TTCATAGTTT TGTTGAGCAG TCGCTGATTG CTAAAGTGGG AGACCTAGGT
AAAAAGCTAC ATACGGGCCG CTCGCGTAAC GATCAGGTAG CGACGGATCT TAAGCTTTGG
TGTAAGAAAG AAGGTGAGCA GTTACTCGGT TTACTTGCTA ACTTAAGAGC GGCATTGATC
GGACTTGCCG AGCGTGAAAT CGATGCGGTG ATGCCGGGTT ATACACATCT GCAAAGAGCA
CAGCCAATAT TGTTTGGTCA TTGGTGTTTA GCTTATGTGG AGATGTTTGA ACGTGATATT
AGCCGTCTGC AAGATGCGCT TAAGCGTGCC GATACTTGTC CGTTAGGTAC GGGAGCATTA
GCAGGTACAG CTTATCCGAT GGACAGGGTG AAGCTGGCAA AATCCTTAGG GTTTGCCTCG
CCGACACTCA ATAGTTTAGA TACGGTTTCA GACCGAGATC ATGTGATTGA GATCTGCAGC
AATGCCTCTA TCAGTATGAT GCACTTGAGT CGGATGGCTG AAGATTTAAT CTTCTTTAAT
AGTGGTGAAG CGGGCTTTAT TGAATTAGAC GATGAAGTCA CGTCAGGCTC GTCACTGATG
CCGCAGAAGA AAAACCCTGA TGCATTGGAG CTAATTAGAG GCAAGACGGG TCGTGTTTAC
GGCGCCTTAA TGGGAATATT AACCACCATG AAAGCATTGC CGCTTGCGTA CAACAAAGAT
ATGCAGGAAG ACAAAGAAGG CCTGTTCGAT GTAATGGATA GCTGGTCGAT CTGTTTAGAA
ATGGCAGCCT TGGTATTAAG TGGCTTGCAG GTTAATAGAG AAAAAACCCT TAAGGCTGCT
AAGCAAGGTT ATGCTAACTC GACTGAACTG GCTGATTATT TAGTGGCGAA AGGGATGCCT
TTTAGAGAAG CACACCACGT GGTTGGTGAA GCAGTCGTGA GTGCTATTGC CAAGCAAACC
CCTCTAGAAG AGTTAACTCT AGTAGAGCTG CAAGCCTTTA GCGCAGCGAT TGAAGCCGAC
GTATATGATT GCTTGACCAT TGAGTCTTGC TTAGCTAAGC GTGAAGCGCT AGGTGGTACC
TCTTTATCTC AAGTTCGTAA CGCATTGGCG ACTAAGAAAG AGAACTGCTA A
 
Protein sequence
MALWGGRFSQ ESSALFKLFN DSLPVDFRLI EQDIVGSIAW ASAITQVGIL TEKECTELHQ 
ALNELLAETQ DSPELIIASG AEDIHSFVEQ SLIAKVGDLG KKLHTGRSRN DQVATDLKLW
CKKEGEQLLG LLANLRAALI GLAEREIDAV MPGYTHLQRA QPILFGHWCL AYVEMFERDI
SRLQDALKRA DTCPLGTGAL AGTAYPMDRV KLAKSLGFAS PTLNSLDTVS DRDHVIEICS
NASISMMHLS RMAEDLIFFN SGEAGFIELD DEVTSGSSLM PQKKNPDALE LIRGKTGRVY
GALMGILTTM KALPLAYNKD MQEDKEGLFD VMDSWSICLE MAALVLSGLQ VNREKTLKAA
KQGYANSTEL ADYLVAKGMP FREAHHVVGE AVVSAIAKQT PLEELTLVEL QAFSAAIEAD
VYDCLTIESC LAKREALGGT SLSQVRNALA TKKENC