| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0215 |
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| Symbol | |
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| ID | 5660615 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 227185 |
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| End bp | 227835 |
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| Gene Length | 651 bp |
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| Protein Length | 216 aa |
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| Translation table | 11 |
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| GC content | 42% |
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| IMG OID | 641234736 |
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| Product | cytochrome c biogenesis protein CcmA |
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| Protein accession | YP_001500078 |
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| Protein GI | 157960044 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG4133] ABC-type transport system involved in cytochrome c biogenesis, ATPase component |
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| TIGRFAM ID | [TIGR01189] heme ABC exporter, ATP-binding protein CcmA |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.0686674 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGGTAAAAG AATCAAAAGC AACAACACTG GTATCAGCTA ATAACTTAAC TTGCATAAGG
GAAGAACGCA TTTTATTTGA TGAACTTAGC TTCGATATAA CCGAAGGTGA GATTGTTCAA
ATTGAAGGCC CTAACGGTGC AGGTAAAACA AGTCTTTTGC GGATCATCGC AGGTTTATCT
CGCCCTTATG CAGGGCAAAT CAACTTCAAA GGTGAAGACA TTAACCGTTG TCGTGACGAG
TACAATGATG AATTGTTGTA CCTTGGCCAC CTTGCAGGTG TTAAAAGTGA GTTAACGGCT
GAAGAAAATC TTAACTTCAA TTTAAGGATC AGTGGGTATG ATGATTTCGA TGCCCGTCAG
ATCCTTGCAA AAGTCAATCT CTCAGGTTTT GAAGAAGCGC TCGCAGGACA CTTATCGGCA
GGCCAACACA GACGTACAGC CCTTGCTAGG CTCTGGCACA CTAACTGTAA GATATGGCTG
CTAGATGAGC CTTTTACTGC TATCGATAAA AAAGGCGTAG AAGAACTTGA ACACCTATTT
TTAGCCCATG CAAAACGCGG CGGTTGCGTA ATATTAACCA CACACCAAGA TATGGGTGTG
ATTGGCGATG ATATTCTACG TAAAATCCGT CTCGATTATC GCTTTGTATA A
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| Protein sequence | MVKESKATTL VSANNLTCIR EERILFDELS FDITEGEIVQ IEGPNGAGKT SLLRIIAGLS
RPYAGQINFK GEDINRCRDE YNDELLYLGH LAGVKSELTA EENLNFNLRI SGYDDFDARQ
ILAKVNLSGF EEALAGHLSA GQHRRTALAR LWHTNCKIWL LDEPFTAIDK KGVEELEHLF
LAHAKRGGCV ILTTHQDMGV IGDDILRKIR LDYRFV
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