| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0209 |
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| Symbol | |
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| ID | 5660609 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 222618 |
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| End bp | 223607 |
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| Gene Length | 990 bp |
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| Protein Length | 329 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234730 |
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| Product | DNA-directed RNA polymerase subunit alpha |
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| Protein accession | YP_001500072 |
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| Protein GI | 157960038 |
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| COG category | [K] Transcription |
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| COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
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| TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
| Num covering plasmid clones | 4 |
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| Plasmid unclonability p-value | 0.0000128989 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCAGGGTT CTGTTACAGA ATTTCTTAAA CCGCGTCTCG TTGATATCGA GCAGGTTAAT
CCAACACGTG CCAAGGTTAC ACTGGAGCCG CTAGAGCGTG GTTTTGGTCA TACTCTAGGT
AACGCGTTGC GTCGTATCCT ATTGTCGTCT ATGCCAGGCT GCGCGGTTAC CGAAGTAGAG
ATCGATGGTG TACTGCATGA ATACAGTAGC AAGGAAGGCG TGCAAGAAGA TATCCTTGAG
ATACTATTAA ACCTTAAGGG TTTAGCAGTA GTTATCGAAG GGAAAGACGA AGCTATGCTT
ACGCTAAGTA AGTCAGGCGC AGGCCCTGTT ACTGCAGCAG ATATCACGCA TGATGGTGAT
GTTACTATCA TGAATCCTGA CCATGTTATT TGTCATTTGA CAGGTAATAA TGAAGTCAGC
ATGCGTATCC GCGTAGAGCG TGGTCGTGGT TATGTACCGG CTTCTGCCCG TGCACAAACT
GAAGACGATG ATCGCCCTAT CGGCCGTTTG TTGGTTGATT CTTCGTTCTC ACCAGTTGCT
CGCATTGCAT ACAATGTTGA AGCTGCTCGT GTTGAACAGC GTACAGACTT AGATAAACTC
GTTATCGACA TGACCACTAA CGGTACTATC GATCCTGAGG AAGCTATCCG TCGTTCAGCG
ACAATTCTAG CCGAACAGCT AGATGCGTTT GTTGAGTTAC GTGATGTGAC TGAGACTGCA
CCAGTAGAAG AGAAGCCGGA GTTCGATCCG ATTCTGTTGC GTCCTGTCGA CGATTTAGAG
CTAACTGTAC GTTCAGCCAA CTGTTTGAAG GCTGAAGCGA TTCATTACAT CGGCGATCTG
GTACAACGCA CTGAAGTTGA GCTGCTTAAG ACTCCTAACC TAGGTAAGAA ATCTCTTACT
GAAATTAAGG ATGTTTTAGC GTCTCGCGGA CTGTCGTTAG GTATGCGTCT GGAAAACTGG
CCTCCAGCTA GTTTAGCAGA CGACCTTTAA
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| Protein sequence | MQGSVTEFLK PRLVDIEQVN PTRAKVTLEP LERGFGHTLG NALRRILLSS MPGCAVTEVE
IDGVLHEYSS KEGVQEDILE ILLNLKGLAV VIEGKDEAML TLSKSGAGPV TAADITHDGD
VTIMNPDHVI CHLTGNNEVS MRIRVERGRG YVPASARAQT EDDDRPIGRL LVDSSFSPVA
RIAYNVEAAR VEQRTDLDKL VIDMTTNGTI DPEEAIRRSA TILAEQLDAF VELRDVTETA
PVEEKPEFDP ILLRPVDDLE LTVRSANCLK AEAIHYIGDL VQRTEVELLK TPNLGKKSLT
EIKDVLASRG LSLGMRLENW PPASLADDL
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