Gene Spea_0185 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0185 
SymbolrplD 
ID5660586 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp211418 
End bp212023 
Gene Length606 bp 
Protein Length201 aa 
Translation table11 
GC content46% 
IMG OID641234707 
Product50S ribosomal protein L4 
Protein accessionYP_001500049 
Protein GI157960015 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0088] Ribosomal protein L4 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones5 
Plasmid unclonability p-value0.0000178875 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGAATTGG TATTGAAAGA CGCACAGAGT GCTCTTGAAG TTTCCGAAGC TACCTTTGGC 
CGTGACTTTA ATGAAGCACT GGTTCATCAG GTAGTTGTAG CTTACGCTGC AAACGCGCGT 
CAGGGCACTC GTGCTCAAAA GACTCGCGCA GAAGTAACTG GCTCAGGCAA GAAGCCATGG 
CGCCAAAAAG GTACTGGCCG TGCACGTGCT GGTACTGTTA AAGGCCCAAT CTGGCGTGGC 
GGTGGCGTAA CATTCGCTGC TAAAACACAA GATCACAGCC AAAAAGTTAA CAAAAAGATG 
TACCGCGGAG CGCTGAAGAG CATTTTCTCT GAATTGGTAC GTCAAGACCG TCTTATCGTA 
GTTGAGTCGT TCGGTGTTGA AGCTCCTAAA ACTAAAGAGC TGAAAGCTAA ACTAAACGAA 
ATGCAACTTG AAGATGTGTT GATTGTTACT CCAGAAGTTG ACGAGAACTT GTTCTTAGCT 
GCTCGTAACC TTTACAAAGT TGACGTACGT GATGTTGCTG GTATTGATCC AGTTAGCCTT 
ATCGCATTCA ACAAGGTACT AGTTACTGCT GAAGCTATTA AGCAAATCGA GGAGATGCTG 
GGATGA
 
Protein sequence
MELVLKDAQS ALEVSEATFG RDFNEALVHQ VVVAYAANAR QGTRAQKTRA EVTGSGKKPW 
RQKGTGRARA GTVKGPIWRG GGVTFAAKTQ DHSQKVNKKM YRGALKSIFS ELVRQDRLIV 
VESFGVEAPK TKELKAKLNE MQLEDVLIVT PEVDENLFLA ARNLYKVDVR DVAGIDPVSL 
IAFNKVLVTA EAIKQIEEML G