Gene Spea_0170 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0170 
Symbol 
ID5664659 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp192087 
End bp193271 
Gene Length1185 bp 
Protein Length394 aa 
Translation table11 
GC content46% 
IMG OID641234692 
Productelongation factor Tu 
Protein accessionYP_001500034 
Protein GI157960000 
COG category[J] Translation, ribosomal structure and biogenesis 
COG ID[COG0050] GTPases - translation elongation factors 
TIGRFAM ID[TIGR00231] small GTP-binding protein domain
[TIGR00485] translation elongation factor TU 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00000000210333 
Plasmid hitchhikingNo 
Plasmid clonabilityunclonable 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGCTAAAG AAAAATTTGA ACGCGTAAAA CCACACGTAA ACGTTGGTAC CATTGGACAC 
GTTGACCATG GTAAAACTAC TCTAACTGCT GCTATCTCTT CGGTACTAAC GAAGACTTAC
GGTGGTACTA AGCGTGATTT CGCACAGATC GATAACGCTC CAGAAGAGCG TGAGCGCGGT
ATTACAATTA ATACTTCTCA CATCGAATAT GACACTCCAT CACGTCACTA CGCACACGTA
GACTGTCCAG GTCACGCGGA TTATGTTAAA AACATGATCA CTGGTGCTGC ACAGATGGAC
GGCGCTATTC TAGTAGTTGC TTCTACAGAT GGTCCAATGC CACAAACTCG TGAGCACATC
CTGCTTTCAC GTCAGGTTGG CGTACCATTC ATCATCGTAT TCATGAACAA GTGTGACATG
GTTGATGACG AAGAGCTTCT AGAGCTAGTA GAAATGGAAG TTCGTGAACT TCTATCTGAG
TATGACTTCC CAGGTGATGA CCTACCAGTT ATCCAGGGTT CTGCTCTTAA AGCTCTTGAA
GGCGAGCCAG AGTGGGAAGC TAAGATCCTT GAGCTAGCTG AAGCTCTAGA TACTTACATT
CCTGAGCCAG AGCGTGCTAT CGATGGTGCA TTCATTCTTC CAATCGAAGA TGTATTCTCA
ATCGCTGGTC GTGGTACTGT TGTTACTGGT CGTGTAGAGC GCGGTATCAT CAAAGTTGGT
GAAGAAGTAG AAATCGTTGG TATCAAAGAT ACAACTAAGT CTACTTGTAC TGGTGTTGAA
ATGTTCCGTA AGCTTCTTGA CGAAGGTCGT GCTGGCGAGA ACTGTGGTGT TCTTCTACGT
GGTATCAAGC GTGAAGATGT TGAGCGTGGT CAAGTACTAG CTGCTCCAGG TTCAATCACT
CCACACACTA CTTTCAAGTC AGAAATCTAT GTTCTGTCTA AAGAAGAAGG CGGACGTCAC
ACTCCATTCT TCAAAGGCTA CCGTCCACAG TTCTACTTCC GTACAACTGA CGTAACCGGT
ACTATCGAAT TGCCAGAAGG CGTTGAGATG GTAATGCCTG GTGACAACGT AGCTATGACT
GTAACTCTAA TCTGCCCAAT CGCGATGGAC GAAGGTTTAC GCTTCGCTAT CCGTGAAGGT
GGTCGTACAG TTGGTGCTGG TGTTGTAGCT GAGATCGTTG CTTAA
 
Protein sequence
MAKEKFERVK PHVNVGTIGH VDHGKTTLTA AISSVLTKTY GGTKRDFAQI DNAPEERERG 
ITINTSHIEY DTPSRHYAHV DCPGHADYVK NMITGAAQMD GAILVVASTD GPMPQTREHI
LLSRQVGVPF IIVFMNKCDM VDDEELLELV EMEVRELLSE YDFPGDDLPV IQGSALKALE
GEPEWEAKIL ELAEALDTYI PEPERAIDGA FILPIEDVFS IAGRGTVVTG RVERGIIKVG
EEVEIVGIKD TTKSTCTGVE MFRKLLDEGR AGENCGVLLR GIKREDVERG QVLAAPGSIT
PHTTFKSEIY VLSKEEGGRH TPFFKGYRPQ FYFRTTDVTG TIELPEGVEM VMPGDNVAMT
VTLICPIAMD EGLRFAIREG GRTVGAGVVA EIVA