| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0150 |
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| Symbol | |
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| ID | 5660551 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 166162 |
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| End bp | 166887 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641234663 |
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| Product | general secretion pathway protein J |
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| Protein accession | YP_001500014 |
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| Protein GI | 157959980 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4795] Type II secretory pathway, component PulJ |
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| TIGRFAM ID | [TIGR01711] general secretion pathway protein J
[TIGR02532] prepilin-type N-terminal cleavage/methylation domain |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGTGCTTAA GGCTGACTAA ATCTCAGCGT GGCTTCACGC TACTAGAGAT GCTGATCGCC
ATCGCCATTT TTGCCATGCT AGGTTTAGCG GCGAATACCG TGTTGAGCAC AGTGATGAAA
AACGACACCG CGACCCGAGA TTTTGCCGCT AAGCTAAAGG CGATGCAGCA AGGTTTTGGA
GTGATTGAGC GTGACTTAAA CCAGATGGTC GCACGCACGC CTAGGTTATT AGAGGGCGGT
AGAGCCACGA CGGTTTTTCA GACGGGTAGC AATATGCTCG ATTCGGAGTC TGAATCCTTA
GTCTTTTTTC GCTTAGGTTG GCTAAATCCA GACGGACTCT TGCCAAGAGG CAGTTTGCAG
TCGGTTGCCT ATGTGGTGAT GGAAGGGCAG TTGCAGCGTT GGTATTACCC TTATCCTGAA
CCGGAAATTG GTGCAGAGCC AATTAAAACT GTGATTATGG AGAAGGTGCT TTCAGTGGAA
TACGCCTTTT TTACCGATGA CAAATGGGAG CGTCAAACTG ATGCAACTAA GTTACCCAAG
GCGATTGCGA TAGAAATTGA GTTTGAAGAT ATTGGTAAGG TGCAACGTAA ATTCCTAGTG
CCTAAGGGCG CGCTTGCTGG CAGTAACGAT GATACCAATA GTGGTGGCGG AGACGAAGAG
TCTATACCGG ATGGAGACCG TAACAGCGGC AACGGTAGCG ACACCGGAAA AGGGCATGGT
GAATAA
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| Protein sequence | MCLRLTKSQR GFTLLEMLIA IAIFAMLGLA ANTVLSTVMK NDTATRDFAA KLKAMQQGFG
VIERDLNQMV ARTPRLLEGG RATTVFQTGS NMLDSESESL VFFRLGWLNP DGLLPRGSLQ
SVAYVVMEGQ LQRWYYPYPE PEIGAEPIKT VIMEKVLSVE YAFFTDDKWE RQTDATKLPK
AIAIEIEFED IGKVQRKFLV PKGALAGSND DTNSGGGDEE SIPDGDRNSG NGSDTGKGHG
E
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