| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0145 |
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| Symbol | |
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| ID | 5660546 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 161916 |
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| End bp | 163487 |
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| Gene Length | 1572 bp |
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| Protein Length | 523 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234658 |
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| Product | general secretory pathway protein E |
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| Protein accession | YP_001500009 |
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| Protein GI | 157959975 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG2804] Type II secretory pathway, ATPase PulE/Tfp pilus assembly pathway, ATPase PilB |
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| TIGRFAM ID | [TIGR02533] general secretory pathway protein E |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGTGAGA ATTCAATTAT AGTCGATGAA GAGCTAGTGC AGGTCTCGAA TGAGCTTGGA
CTAGTGTCTG AGGAAGAGGC GGATCAGCTT TTTCATTCGA ATAGCAAAGA GCGTTTGCCC
TTTGCTTTTG CCCATAGATT TAAGGTGGCG CTTGCCGCCG ACGCTGACGG CGAGTTGTCG
CTTTACCATA CTCAAGGTAC ACCATTGAGT GCATTGCTTG AGGTACGTCG CTACTGTGGT
AAAGAATTGC CCTTGATAAC GTTAGAAGAC ACAGCTTTTG AGGCGCGTCT TACTCAAGCC
TATCAAGCTA ACTCTTCTGA AGCGCAGCAG ATGATGGAAG ATATCGGTAA TGAAATGGAC
CTGTTCACTC TTGCCGAAGA GTTGCCACAA ACAGAAGATC TACTCGAGGG TGACGATGAC
GCACCGATTA TTAAGTTAAT CAATGCGCTA TTGTCTGAGG CTATTAAGGA AGAAGCGTCA
GATATTCATA TCGAAACCTA CGAGAAACAG TTAATTGTGC GTTTCCGTGT CGATGGCATT
CTCAAAGAAG TTCTCAAGCC TAATCGTAAA CTGTCATCTT TGTTGGTGTC ACGTATCAAG
GTTATGGCAC GTCTCGATAT TGCTGAAAAA CGTGTACCAC AAGATGGTCG CATTTCGCTG
CGTATCGCGG GACGAGCTGT GGATGTGCGT GTATCGACTA TGCCGTCAAG TCATGGCGAG
CGTGTGGTGC TACGTCTACT CGATAAAAAT GCGGGTAACT TAGACCTAGA GCAGCTAGGT
ATGACCGAAG CGGTTCGTCA TCAATTTGAT GACTTAATCC GCAGACCACA CGGTATTATT
TTGGTGACCG GTCCAACCGG TTCGGGTAAG AGTACCACTC TCTATGCAGG CCTTACCGAA
ATTAACTCGA AAGATACCAA CATTCTTACC GTCGAAGACC CAATAGAATA CGAACTCGAA
GGTATTGGTC AGACTCAGGT AAACACTAAG GTCGATATGA CCTTCGCTCG TGGCCTACGT
GCTATTTTGC GTCAAGATCC TGATGTGGTG ATGATTGGTG AGATCCGAGA TCTTGAGACT
GCGCAAATTG CGGTTCAGGC ATCGTTAACT GGCCATATGG TTATCTCAAC CCTACATACT
AATACGGCAT CGGGCGCGAT TACTCGTTTA CAAGATATGG GCGTAGAACC TTTCCTCGTG
TCTTCCAGTT TACTTGGTGT CCTCGCTCAA CGTCTTATCC GTACCTTGTG CCCAAGCTGT
AAAGAGTCGC ATACCCCGGA TAATCGTGAA AGAGAGCTTC TCGGTATTAC CGCTGACGAT
CCTCGTGTTA TTTTCCGCGC GAAGGGTTGT CAGGCTTGTG GTCACAATGG TTATCGTGGC
CGTACCGGTA TTCATGAGTT ACTCATAGTC GATGATCATG TGCGTGAACT TATTCACACC
GGTCGCGGTG AATTAGCGAT TGAAAAGCAT ATTCGTCAAT CTGTTCCGAG CATTCGTCAC
GACGGTATGA GTAAAGTGCT TGCGGGGAAA ACTACCCTAG AAGAAGTGCT GCGTGTCACT
CGAGAGGAGT AA
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| Protein sequence | MSENSIIVDE ELVQVSNELG LVSEEEADQL FHSNSKERLP FAFAHRFKVA LAADADGELS
LYHTQGTPLS ALLEVRRYCG KELPLITLED TAFEARLTQA YQANSSEAQQ MMEDIGNEMD
LFTLAEELPQ TEDLLEGDDD APIIKLINAL LSEAIKEEAS DIHIETYEKQ LIVRFRVDGI
LKEVLKPNRK LSSLLVSRIK VMARLDIAEK RVPQDGRISL RIAGRAVDVR VSTMPSSHGE
RVVLRLLDKN AGNLDLEQLG MTEAVRHQFD DLIRRPHGII LVTGPTGSGK STTLYAGLTE
INSKDTNILT VEDPIEYELE GIGQTQVNTK VDMTFARGLR AILRQDPDVV MIGEIRDLET
AQIAVQASLT GHMVISTLHT NTASGAITRL QDMGVEPFLV SSSLLGVLAQ RLIRTLCPSC
KESHTPDNRE RELLGITADD PRVIFRAKGC QACGHNGYRG RTGIHELLIV DDHVRELIHT
GRGELAIEKH IRQSVPSIRH DGMSKVLAGK TTLEEVLRVT REE
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