Gene Spea_0126 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0126 
Symbol 
ID5660527 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand+ 
Start bp138483 
End bp139061 
Gene Length579 bp 
Protein Length192 aa 
Translation table11 
GC content44% 
IMG OID641234639 
Productankyrin 
Protein accessionYP_001499990 
Protein GI157959956 
COG category[R] General function prediction only 
COG ID[COG0666] FOG: Ankyrin repeat 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCACCGTA CTTTTTCATT GAAACAAACC ATTCCCCTGT GGTGGCTGGC TCTAGTTGTG 
AGCATTTTAA CAGCTATATT CAGTACCAAT AACGCTCAGG TTAACTCGCT TGAAATCGAA 
AATTCAGATA AGCGTCTTGG GTTACAAGTT AACAGCCAAA CCGCACAAAT GCGGCTATTG 
GTCGACTATT TCTTTGCTGC AGCAAGAACG GGTGATATTG AGGTGTTAAA TCACTTTATC 
GAAGCGGGCT TTCCCATCGA TCAGCGTAAT AATCAAAGTT ATAGTGCGCT GATGGTTGCA 
GCATACAATG GCCAAGCACA GGCTGCGTCT GTTTTACTTG AGCATGGCGC GAATGCGTGT 
CTTCAAGATA AGCGTGGCAA TACCGCTATG ATGGGCGCTG TTATTAAGGC TGAGTTCGCA 
ATAGTAAAAC AGCTATATAG TCAGGAATGT GATGCAGAGT TAACCAATAA TTCGGGGATG 
ACATTGCAAG AGTTTGCTCA ATATTGGGGG CAAAGTAGCA AACTAAAGGA AGCAAGTTTA 
GCTGCAAAGC AGTCGTTGTT ATCTTCAGCG GTGCTCTGA
 
Protein sequence
MHRTFSLKQT IPLWWLALVV SILTAIFSTN NAQVNSLEIE NSDKRLGLQV NSQTAQMRLL 
VDYFFAAART GDIEVLNHFI EAGFPIDQRN NQSYSALMVA AYNGQAQAAS VLLEHGANAC 
LQDKRGNTAM MGAVIKAEFA IVKQLYSQEC DAELTNNSGM TLQEFAQYWG QSSKLKEASL 
AAKQSLLSSA VL