Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0112 |
Symbol | |
ID | 5660513 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | + |
Start bp | 125661 |
End bp | 126743 |
Gene Length | 1083 bp |
Protein Length | 360 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 641234625 |
Product | hypothetical protein |
Protein accession | YP_001499976 |
Protein GI | 157959942 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 29 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACCCTAG CCGCCCCTAA ATTTCTATTT GTGCCCGTGT CTTCAGCTGA GGGGGTCGGT GAGTATATGC GTTCGTTAAT CGTTGCCGAT GAGGTTAAGC AGCGCTGGCC CAATGCGACG ATTCAATTTA TTTTAAGTCG TCAGGCTCCT TATGCCCTAA CTTGCCCCTA TCCTGCAGCG CTTTTGGATG ATACGCCAAC CAAGAATATT AAAGCAGTAA ATGACTTTAT GTCTTTCTTC CTGCCAGACT TTGTCATCTT TGATGCATCG GGTCGCCGCT CTCAATTGGT ACATGCGAAT AAGCTAGGCG CAAAAGTTAT TTTCCTGAGT CAACATAAGC GTAAACGCAG TAGAGGAATG AAAATACTGC GAGCGCGGGT AACCGATAGC CATTGGGTGG TACAGCCTGA ATTCGTTATA GGCCCAATTA GTTGGCTAGA CAGACTAAAA TTGAGATTAA TTGAAAAGCC AGAGCCAACA GTTACTGGAC CCATTTTTGT TAATCCTAAC CCTAAACATC AAGCTGCTCT TCTTAGTGAG TATGGCCTAA CTGTCGGTGA GTTCATCATA CTCAACGCTG GCTCGGGAGG GCACACTAAT AGTCGCGGCT TTATTGTTGA AGAATTTGCT CTCGCGGCAG CTAGTATTTA CCAAGCAACG CAGATCCCCT GTGTGATCGT CTATGGACCG AATTACCCTA ACACGATGAT TGAGGCTGAA GGGGTTACAG CTATACAGGA GCTGAACCAT GGTGAGCTAA TCGATTTGCT CGATGCCGCA AAAGTTGCAG TGTTAAGTGG TGGAGATACT TTACTGCAGG CAATCGCGTT GAAGAAACCA TGCTTATCGG TCGCTGTATC GAAAGATCAA AATTACCGAC TAAAAGTTTG TGAAGAAAGG GGGTTAACCG TCTGCAGCGA CAATAAAGCG CAACGGATAT CGGATGGACT CGTAGAGTTA ATGCAGGCTG ATAACTTGTT AAAGTTAGAA ACGGCTTTGG CGCAGTGTGA CTGCGTTAAT GGTTTGGAGC TGGGGATGAA TATTATCACA GCGCTATACC GTAATAAATT TGGAGTTCAT TGA
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Protein sequence | MTLAAPKFLF VPVSSAEGVG EYMRSLIVAD EVKQRWPNAT IQFILSRQAP YALTCPYPAA LLDDTPTKNI KAVNDFMSFF LPDFVIFDAS GRRSQLVHAN KLGAKVIFLS QHKRKRSRGM KILRARVTDS HWVVQPEFVI GPISWLDRLK LRLIEKPEPT VTGPIFVNPN PKHQAALLSE YGLTVGEFII LNAGSGGHTN SRGFIVEEFA LAAASIYQAT QIPCVIVYGP NYPNTMIEAE GVTAIQELNH GELIDLLDAA KVAVLSGGDT LLQAIALKKP CLSVAVSKDQ NYRLKVCEER GLTVCSDNKA QRISDGLVEL MQADNLLKLE TALAQCDCVN GLELGMNIIT ALYRNKFGVH
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