Gene Spea_0112 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSpea_0112 
Symbol 
ID5660513 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella pealeana ATCC 700345 
KingdomBacteria 
Replicon accessionNC_009901 
Strand
Start bp125661 
End bp126743 
Gene Length1083 bp 
Protein Length360 aa 
Translation table11 
GC content46% 
IMG OID641234625 
Producthypothetical protein 
Protein accessionYP_001499976 
Protein GI157959942 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones29 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACCCTAG CCGCCCCTAA ATTTCTATTT GTGCCCGTGT CTTCAGCTGA GGGGGTCGGT 
GAGTATATGC GTTCGTTAAT CGTTGCCGAT GAGGTTAAGC AGCGCTGGCC CAATGCGACG
ATTCAATTTA TTTTAAGTCG TCAGGCTCCT TATGCCCTAA CTTGCCCCTA TCCTGCAGCG
CTTTTGGATG ATACGCCAAC CAAGAATATT AAAGCAGTAA ATGACTTTAT GTCTTTCTTC
CTGCCAGACT TTGTCATCTT TGATGCATCG GGTCGCCGCT CTCAATTGGT ACATGCGAAT
AAGCTAGGCG CAAAAGTTAT TTTCCTGAGT CAACATAAGC GTAAACGCAG TAGAGGAATG
AAAATACTGC GAGCGCGGGT AACCGATAGC CATTGGGTGG TACAGCCTGA ATTCGTTATA
GGCCCAATTA GTTGGCTAGA CAGACTAAAA TTGAGATTAA TTGAAAAGCC AGAGCCAACA
GTTACTGGAC CCATTTTTGT TAATCCTAAC CCTAAACATC AAGCTGCTCT TCTTAGTGAG
TATGGCCTAA CTGTCGGTGA GTTCATCATA CTCAACGCTG GCTCGGGAGG GCACACTAAT
AGTCGCGGCT TTATTGTTGA AGAATTTGCT CTCGCGGCAG CTAGTATTTA CCAAGCAACG
CAGATCCCCT GTGTGATCGT CTATGGACCG AATTACCCTA ACACGATGAT TGAGGCTGAA
GGGGTTACAG CTATACAGGA GCTGAACCAT GGTGAGCTAA TCGATTTGCT CGATGCCGCA
AAAGTTGCAG TGTTAAGTGG TGGAGATACT TTACTGCAGG CAATCGCGTT GAAGAAACCA
TGCTTATCGG TCGCTGTATC GAAAGATCAA AATTACCGAC TAAAAGTTTG TGAAGAAAGG
GGGTTAACCG TCTGCAGCGA CAATAAAGCG CAACGGATAT CGGATGGACT CGTAGAGTTA
ATGCAGGCTG ATAACTTGTT AAAGTTAGAA ACGGCTTTGG CGCAGTGTGA CTGCGTTAAT
GGTTTGGAGC TGGGGATGAA TATTATCACA GCGCTATACC GTAATAAATT TGGAGTTCAT
TGA
 
Protein sequence
MTLAAPKFLF VPVSSAEGVG EYMRSLIVAD EVKQRWPNAT IQFILSRQAP YALTCPYPAA 
LLDDTPTKNI KAVNDFMSFF LPDFVIFDAS GRRSQLVHAN KLGAKVIFLS QHKRKRSRGM
KILRARVTDS HWVVQPEFVI GPISWLDRLK LRLIEKPEPT VTGPIFVNPN PKHQAALLSE
YGLTVGEFII LNAGSGGHTN SRGFIVEEFA LAAASIYQAT QIPCVIVYGP NYPNTMIEAE
GVTAIQELNH GELIDLLDAA KVAVLSGGDT LLQAIALKKP CLSVAVSKDQ NYRLKVCEER
GLTVCSDNKA QRISDGLVEL MQADNLLKLE TALAQCDCVN GLELGMNIIT ALYRNKFGVH