| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0102 |
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| Symbol | |
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| ID | 5660503 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 113799 |
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| End bp | 116555 |
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| Gene Length | 2757 bp |
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| Protein Length | 918 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234615 |
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| Product | DNA polymerase I |
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| Protein accession | YP_001499966 |
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| Protein GI | 157959932 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0749] DNA polymerase I - 3'-5' exonuclease and polymerase domains |
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| TIGRFAM ID | [TIGR00593] DNA polymerase I |
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Plasmid Coverage information |
| Num covering plasmid clones | 11 |
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| Plasmid unclonability p-value | 0.758898 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTAAAA TTGCCGACAA CCCTTTAATT CTTGTGGATG GTTCTTCATA CCTCTACCGC
GCCTACTATG CACCACCTCA CCTAACGAAT TCTAAGGGAG AAGCAACTGG TGCCGTATAC
GGCGTTATCA ACATGCTTCG TAGCCTACTA AACCAATATA AGCCATCACA AATGGCTGTG
GTTTTTGACG CAAAAGGCAA AACATTCCGT AACGACATGT ATTCGGAATA TAAGGCGCAG
CGTCCACCTA TGCCTGATGA TCTACGCACG CAAATCGAGC CGTTGCATAG AATCATTAAA
GCTCTGGGTT TACCTCTTGT ATCCATTTCT GGCGTTGAAG CCGACGATGT TATCGGCACC
ATTGCGACCC AAGCCAGTAA AGAAGGCCGC GCGGTATTGA TCAGCACCGG CGATAAAGAT
ATGGCGCAAT TAGTGGATGA AAACGTCACG CTAATTAATA CCATGACTAA CACCATCATG
GGGCCGGCCG AGGTCACCGA GAAATTTGGT GTTGGACCAG AGTTAATTAT CGACTTACTA
GCCTTGCAAG GTGATAAGGC CGATAACATT CCAGGCCTGC CCGGTGTTGG CGAGAAAACG
GCACTCGCTA TGCTAACAGG TGTCGGTGGT GTCGATAAGA TCCTTGCTGC GCCAGAGAAG
ATGCCAGAGC TAGGCTTTCG CGGGTCGAAA ACTATGCCAG CTAAGATTAT TGAGCATGCC
GATATGCTCA AATTGAGCTA TGAACTTGCA ACCATCAAGT TAGATGTCGA ACTTGAGCAA
GATTGGCATC AACTGTCGAT AACACCTGCA GACAAAGACG AACTCATTAA GTGTTACGGT
GAGATGGAGT TTAAGCGCTG GCTAGCAGAA GTGCTCGATA ACAAGGGCGA TACCACAGCA
GCCACAGAGT CTGAAGATGA TGCCCCTGCA GCAAAGCTAG ATATCGAAGT TGAGTACGAT
ACCATTCTGA GCCTAGAGCA ACTCGATTGC TGGATTGAAA AATTAACAGC TGCAGAGCTT
ATCGCCATCG ACACCGAAAC CACTAGCCTC AATTATATGG AGGCTAAGCT AGTCGGCATC
TCTTTCGCGG TTGAAGCAGG TAAGGCGGCT TATCTACCTC TAGAGCATGA CTACGTCGAT
GCTCCCGAGC AGTTAGATCG CGCCCTTGTA TTTGAAAAAC TACAACCACT GCTTGAAGAT
GAAAACCTTA AAAAAGTTGG TCAAAATCTA AAGTACGACA TCAGCATTTT TGCCAACATT
GGCATCACTT TACGTGGCGT ACAGTTCGAT ACAATGCTTG AGTCCTATGT GTTCAACTCT
GTGGCTTCAA AGCACAACAT GGATGATTTG GCACTTAAAT ACCTTGGCCA TAAGAACATC
AGTTTCGAAG AGATTGCTGG TAAAGGCGTT AAGCAGCTGA CCTTTAATCA AATTCCTCTT
GAAACTGCCG CGCCTTATGC CGCAGAAGAT GCCGATATTA CTCTGCGTCT GCATCAGCAC
CTTTGGTCAA GACTAGAAAA GCTGCCTGAG CTGGCCAGTG TATTCACTGA TATTGAGTTG
CCACTGGTTA ATACCTTATC GAATATCGAA CGCCAAGGCG TGTTAATCGA CAGTATGTTG
CTCGGTCAGC AGAGTGAAGA GCTTGCACGC AAGATTGATG AGTTAGAGCA TAAAGCCCAT
GAAATTGCCG GTGAGCCATT CAATTTAAGC TCGCCTAAAC AGTTACAGGC GCTATTCTTT
GAAAAACTGG GTTATCCCGT GATCAAGAAG ACCCCTAAAG GTGCACCTTC AACAGCCGAA
GAAGTGCTGG TTGAATTAGC ACTAGATTAC CCGTTGCCGA AGATTATTTT AGAGCATCGC
AGTCTAGCTA AACTAAAGAG CACTTACACA GATAAACTAC CGTTAATGGT TAATGCCAAA
ACAGGCCGTG TACATACTAG CTACCATCAA GCCAATGCAG CAACGGGACG CTTATCATCG
AGCGAGCCTA ATCTGCAGAA TATCCCAATC CGTACCGAAG AGGGTCGCCG TATTCGTCAC
GCGTTTATCG CACCAGAGGG TAAAAAAATC CTCGCAGCCG ATTACTCACA GATCGAATTG
AGAATTATGG CCCATCTTTC ACAAGATACA GGTCTACTTA CCGCCTTTGC GGAAGGTAAA
GACATTCATA AAGCGACCGC AGCAGAAGTA TTCGATGTTG ATTTTAGTGA AGTGACCTCA
GATCAGCGTC GCCGCGCTAA AGCGGTTAAC TTCGGTTTGA TCTACGGTAT GTCTGCGTTT
GGTCTTGCCA AGCAGCTTGA TATCCCAAGA GCCGAAGCAC AAAGCTATAT CGACACTTAC
TTTAAGCGCT ACCCGGGCGT ACTGAAGTAT ATGGAAGAGA CCCGCGCCAT CGCAGCCGAT
CTAGGTTACG TATCGACGCT ATTCGGTCGT CGCCTCTATC TGCCAGCCAT TAAAGATAGA
AACGCCATGC GTAGACAAGC TGCCGAACGC GCAGCGATCA ACGCGCCTAT GCAAGGTACC
GCTGCCGATA TCATTAAGAA AGCCATGATT AATATCGCAC AGTGGATTGA AACCGAAACC
CAAGGCGAAA TCATTATGAT CATGCAGGTT CACGATGAAT TGGTGTTTGA GGTCGATGAA
GCAAAGGCCG ATAGCTTGCA GGCTAAGGTG TGTGAATTGA TGGCCGCCGC AGCCAAGCTA
GATGTTGAGC TGTTGGCAGA AGCTGGCATA GGTGACAACT GGGAACAAGC TCACTAA
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| Protein sequence | MPKIADNPLI LVDGSSYLYR AYYAPPHLTN SKGEATGAVY GVINMLRSLL NQYKPSQMAV
VFDAKGKTFR NDMYSEYKAQ RPPMPDDLRT QIEPLHRIIK ALGLPLVSIS GVEADDVIGT
IATQASKEGR AVLISTGDKD MAQLVDENVT LINTMTNTIM GPAEVTEKFG VGPELIIDLL
ALQGDKADNI PGLPGVGEKT ALAMLTGVGG VDKILAAPEK MPELGFRGSK TMPAKIIEHA
DMLKLSYELA TIKLDVELEQ DWHQLSITPA DKDELIKCYG EMEFKRWLAE VLDNKGDTTA
ATESEDDAPA AKLDIEVEYD TILSLEQLDC WIEKLTAAEL IAIDTETTSL NYMEAKLVGI
SFAVEAGKAA YLPLEHDYVD APEQLDRALV FEKLQPLLED ENLKKVGQNL KYDISIFANI
GITLRGVQFD TMLESYVFNS VASKHNMDDL ALKYLGHKNI SFEEIAGKGV KQLTFNQIPL
ETAAPYAAED ADITLRLHQH LWSRLEKLPE LASVFTDIEL PLVNTLSNIE RQGVLIDSML
LGQQSEELAR KIDELEHKAH EIAGEPFNLS SPKQLQALFF EKLGYPVIKK TPKGAPSTAE
EVLVELALDY PLPKIILEHR SLAKLKSTYT DKLPLMVNAK TGRVHTSYHQ ANAATGRLSS
SEPNLQNIPI RTEEGRRIRH AFIAPEGKKI LAADYSQIEL RIMAHLSQDT GLLTAFAEGK
DIHKATAAEV FDVDFSEVTS DQRRRAKAVN FGLIYGMSAF GLAKQLDIPR AEAQSYIDTY
FKRYPGVLKY MEETRAIAAD LGYVSTLFGR RLYLPAIKDR NAMRRQAAER AAINAPMQGT
AADIIKKAMI NIAQWIETET QGEIIMIMQV HDELVFEVDE AKADSLQAKV CELMAAAAKL
DVELLAEAGI GDNWEQAH
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