Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Spea_0100 |
Symbol | |
ID | 5660501 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella pealeana ATCC 700345 |
Kingdom | Bacteria |
Replicon accession | NC_009901 |
Strand | - |
Start bp | 111657 |
End bp | 112277 |
Gene Length | 621 bp |
Protein Length | 206 aa |
Translation table | 11 |
GC content | 44% |
IMG OID | 641234613 |
Product | cytochrome c class I |
Protein accession | YP_001499964 |
Protein GI | 157959930 |
COG category | [C] Energy production and conversion |
COG ID | [COG2863] Cytochrome c553 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 26 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAAAAAGT TAGCTCTTGC GCTGTCTGTT TTAGCCACAA TCTCTTTACC TGCAATGGCC GAAGGAAATG CCGAAGCCGG AAAAACTAAA GCCATTGTTT GTTCTGCTTG TCACGGTGTT GACGGCAACA GCATGATAGA CATGTATCCT AAACTTGCAG GTCAACACGT TACCTACCTA GAAAAGCAGC TACATGATTT CCGCAGTGCA GCACAAACTG GTGGAAAAGA AGGTCGTATG GACCCAATCA TGGGCGGCAT GTCTGTCACT CTGAGCGATC AAGATATCGC AGACATTTCT GCCTTTTATG CTAGCCAAGA AAACAAAGAT ATCGAAGTTA AAGATATCCC AGAACTAGGA GCACAGCTCT ATACCACCGG TGACTCGGCT CGCGGCATCA CAGCCTGTAT CGCTTGTCAT GGTCCTGAAG GTAAAGGAAC TGAGCTTGCA GGCTTCCCTG CAATCAACAG CCAACATGCA AATTATATCA AGATCCAGCT AAATAAGTTC CACGATACAA ATCGTAACAA CGACTTAAAT GGCATGATGC AAGACGTCGC GAAAAAGTTA AATGCAGCCG ACATCGAAGC ATTATCTAAA TATATATCAA GCCTTAAGTA A
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Protein sequence | MKKLALALSV LATISLPAMA EGNAEAGKTK AIVCSACHGV DGNSMIDMYP KLAGQHVTYL EKQLHDFRSA AQTGGKEGRM DPIMGGMSVT LSDQDIADIS AFYASQENKD IEVKDIPELG AQLYTTGDSA RGITACIACH GPEGKGTELA GFPAINSQHA NYIKIQLNKF HDTNRNNDLN GMMQDVAKKL NAADIEALSK YISSLK
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