| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0091 |
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| Symbol | |
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| ID | 5660492 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 99901 |
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| End bp | 100680 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 47% |
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| IMG OID | 641234604 |
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| Product | flagellar biosynthetic protein FliR |
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| Protein accession | YP_001499955 |
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| Protein GI | 157959921 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1684] Flagellar biosynthesis pathway, component FliR |
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| TIGRFAM ID | [TIGR01400] flagellar biosynthetic protein FliR |
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Plasmid Coverage information |
| Num covering plasmid clones | 39 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGTCTC TTACCTCTAC CGAACTGAGT ACTTTTATTG GCACCTTTTG GTGGCCATTT
TGCCGAATTA TGGGGGCCTT TATGGTCATG CCATTTTTAA GCAGCACCTA TATCCCAGTT
ACGGTACGAA TTTTACTCGC ATTAACATTA TCGGCGCTGA TAGCACCGAT GTTACCACCA
TTACCAGAAG TTGATGCAAT CTCGATACAG GCACTTTTAC TCGCCATTGA GCAGCTGCTG
GTAGGGTTTA TGATGGCGCT ATTTCTCACC ATTATGCTCT ATGTCATGAC GCAGCTAGGT
GAGATGCTAT CTATGCAGAT GGGTCTGGCG ATGGCGGTGA TGAACGACCC CTCTAGTGGT
GGCTCACACC CTATTCTTGG TCAATGGTTC CTGCTCTATG GCACCTTGGT ATTCTTAGTG
CTTGATGGGC ACTTAGTGGC GATTGGTGTG CTGGTCGATA GCTTTAGATT ATGGCCTGTG
GGTATGGGCG TGTTTGACCT ACCGCTAATG GGGCTAATCG GTCGTATTAG CTGGCTATTT
GCTGTTTCGT TTATGCTTGC TATCCCTTCT ATCCTTGCCA TGTTAATGGT CAACATTACC
TTCGGTGTCT TGAGCCGTTC GGCGCCATCA CTAAACGTTT TTGCTCTGGG CTTCCCGATG
TCAATGTTGA TGGGGTTGCT ATGTGTTTTC TTTTCATTCA GTGGCTTACC CAGTCGCTAT
AGTGATCTCT GTTTAGACGC CTTGTCTGCC ATGTATCAGT TTATTGGGGG GATAACATGA
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| Protein sequence | MLSLTSTELS TFIGTFWWPF CRIMGAFMVM PFLSSTYIPV TVRILLALTL SALIAPMLPP
LPEVDAISIQ ALLLAIEQLL VGFMMALFLT IMLYVMTQLG EMLSMQMGLA MAVMNDPSSG
GSHPILGQWF LLYGTLVFLV LDGHLVAIGV LVDSFRLWPV GMGVFDLPLM GLIGRISWLF
AVSFMLAIPS ILAMLMVNIT FGVLSRSAPS LNVFALGFPM SMLMGLLCVF FSFSGLPSRY
SDLCLDALSA MYQFIGGIT
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