| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0070 |
|---|
| Symbol | |
|---|
| ID | 5660471 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 83033 |
|---|
| End bp | 83818 |
|---|
| Gene Length | 786 bp |
|---|
| Protein Length | 261 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 49% |
|---|
| IMG OID | 641234583 |
|---|
| Product | flagellar basal-body rod protein FlgG |
|---|
| Protein accession | YP_001499934 |
|---|
| Protein GI | 157959900 |
|---|
| COG category | [N] Cell motility |
|---|
| COG ID | [COG4786] Flagellar basal body rod protein |
|---|
| TIGRFAM ID | [TIGR02488] flagellar basal-body rod protein FlgG, Gram-negative bacteria
[TIGR03506] fagellar hook-basal body proteins |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.584028 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGCAATCAG CTTTATGGGT CAGTAAAACC GGCTTAACCG CCCAAGATAC TAAGATGACC
ACCATTGCCA ACAACTTGGC AAACGTTAAC ACCACAGGTT TCAAACGCGA CCGCGTGGCC
TTTAATGATC TTTTCTATCA GGTACAACGC CAGCCTGGTG GTCAAGTTGA TGAACAGAAT
CAACTGCCTG CAGGCCTACA GCTGGGTACA GGTACTCGAG TTGCTGGTAC GCAAAAGGTA
TTCACCCCTG GTGACATGTT GACCACCAAT CAACAGCTAG ATTTGGCTAT TGAAGGCCAA
GGCTTCTTCC AAATCGAAGA GGCCAATGGT GATGTGAGCT TTACTCGAGA TGGCCAATTT
TACCGTGATA GCGATGGCTT AATGGTGACA TCTCAAGGCT TACCTTTAGT GCCTAACATC
CAAATTCCTG ATGAAGCACT GACAGTGACA ATCGCCTCCG ACGGTATTGT CTCGGCTCAA
ATGGCTGGCC AGGCGGACTC TCAAGAGCTA GGGCAAATCA CCCTAGTTAA CTTCACTAAC
CCTGCAGGTT TAGAAGCTCG TGGTAGCAAC TTATACCGTG AAACGGGCGC TTCTGGCGCT
GCGATTGAGG GGATAGCTGG CGATGAAGCC TTAGGCCAAG TTCGCCAAGG AGCGTTAGAA
GGCGCTAACG TAAACGTGGT CGAAGAGATG GTCGAGATGA TTTCGACACA ACGTGCTTAC
GAGATGAACG CCAAAGTCGT ATCGGCCTCT GACGATATGC TTAAGTTCCT AAATCAAGCG
CTGTAA
|
|---|
| Protein sequence | MQSALWVSKT GLTAQDTKMT TIANNLANVN TTGFKRDRVA FNDLFYQVQR QPGGQVDEQN
QLPAGLQLGT GTRVAGTQKV FTPGDMLTTN QQLDLAIEGQ GFFQIEEANG DVSFTRDGQF
YRDSDGLMVT SQGLPLVPNI QIPDEALTVT IASDGIVSAQ MAGQADSQEL GQITLVNFTN
PAGLEARGSN LYRETGASGA AIEGIAGDEA LGQVRQGALE GANVNVVEEM VEMISTQRAY
EMNAKVVSAS DDMLKFLNQA L
|
|---|
| |