| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0038 |
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| Symbol | |
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| ID | 5660439 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | + |
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| Start bp | 41250 |
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| End bp | 42164 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 49% |
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| IMG OID | 641234545 |
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| Product | coproporphyrinogen III oxidase |
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| Protein accession | YP_001499902 |
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| Protein GI | 157959868 |
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| COG category | [H] Coenzyme transport and metabolism |
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| COG ID | [COG0408] Coproporphyrinogen III oxidase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.381478 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGAGCACAC CCGATTCAAC ACTAGTAAAA GCTTTCTTAC TCGATCTTCA AAATCGAATT
TGTAATGGAC TCGAAGCATT GGATGGCGCT GCGCAATTTG CTGAAGACTC TTGGAAGCGC
GAAGAAGGCG GCGGTGGCCA AAGCCGTGTG TTGACTGGCG GTGCTGTATT TGAACAAGCC
GGGGTAAACT TTTCCCACGT GATGGGCGCT TCAATGCCTG CATCGGCAAC GGCGCATCGT
CCAGAGCTTG CGGGTCGCAG TTTCGAAGCC ATGGGAGTGT CGTTAGTTAT TCACCCTAAA
AATCCTCACA TTCCAACGAC TCATGCCAAT GTGCGTTTCT TTATCGCCCA TAAAGAAGGG
GCCGATCCAG TCTGGTGGTT TGGTGGTGGC TTTGACTTAA CTCCATACTA TCCGTATTTA
GAAGATGTGG TGGAGTGGCA TCAGAGCGCC AAATCTTTAT GTGAGCCATT TGGTGAAGAG
GTTTACCCTA AGTATAAGCA GTGGTGTGAT GAATACTTCT GGTTACCGCA TCGTAATGAG
ACGCGTGGCG TTGGCGGACT CTTCTTCGAT GATCTCAATA AGCAGGGCTT CGAACAGAGT
TTTGCTTTTA TGCAGGCGGT AGGTAATGGC TTCTTAACGG CGTACGCCCC TATCGTTGAG
CGTCGTAGAG ATACTGAATA TGGCGAGCAT GAACGCCAGT TCCAACTATA TCGTCGTGGG
CGCTATGTTG AGTTTAATTT GGTTTATGAT CGTGGCACGC TATTCGGTCT GCAAACTGGT
GGGCGTACAG AGTCGATACT GATGTCTATG CCGCCACTCG TGCGCTGGGA GTATGCCTAT
ACACCAGAAG CGGGTGGTCC AGAGGCGCAG CTTTATAGTG ATTACCTAAA GCCCCGAGAC
TGGTTAAACC TTTAA
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| Protein sequence | MSTPDSTLVK AFLLDLQNRI CNGLEALDGA AQFAEDSWKR EEGGGGQSRV LTGGAVFEQA
GVNFSHVMGA SMPASATAHR PELAGRSFEA MGVSLVIHPK NPHIPTTHAN VRFFIAHKEG
ADPVWWFGGG FDLTPYYPYL EDVVEWHQSA KSLCEPFGEE VYPKYKQWCD EYFWLPHRNE
TRGVGGLFFD DLNKQGFEQS FAFMQAVGNG FLTAYAPIVE RRRDTEYGEH ERQFQLYRRG
RYVEFNLVYD RGTLFGLQTG GRTESILMSM PPLVRWEYAY TPEAGGPEAQ LYSDYLKPRD
WLNL
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