| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0018 |
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| Symbol | fadB |
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| ID | 5660419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella pealeana ATCC 700345 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009901 |
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| Strand | - |
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| Start bp | 20191 |
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| End bp | 22344 |
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| Gene Length | 2154 bp |
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| Protein Length | 717 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 641234525 |
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| Product | multifunctional fatty acid oxidation complex subunit alpha |
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| Protein accession | YP_001499882 |
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| Protein GI | 157959848 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1024] Enoyl-CoA hydratase/carnithine racemase
[COG1250] 3-hydroxyacyl-CoA dehydrogenase |
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| TIGRFAM ID | [TIGR02437] fatty oxidation complex, alpha subunit FadB |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGATCTACC AAAGCCCTAC AATTGAGGTT GAGTTACTCG AAGACAATAT CGCCCACCTG
TGCTTCAAGG CACAAGGCTC GGTTAATAAG TTCGACAGAG AAACCATCGA CTCATTAAAT
GCTGCACTCG ACAGCATCAA ACAAGATTCT AGCATCAAAG CACTTATGTT AAGTTCGGCC
AAAGACGCTT TCGTCGTTGG CGCCGATATC ACTGAGTTTC TAGGATTATT TGCTGAAGAG
GACACGGTCT TACAGTCTTG GTTAGAGCAA GCCAATGTGG TTTTCAACAA GCTAGAAGAT
CTACCCTTCC CAACAATTTC GGCAATTAAT GGTTTTGCAC TAGGCGCAGG CTGCGAAACC
ATTCTAGCTA CAGACTTCCG TATAGCAGAC ACCACTGCCC GCATAGGTCT ACCAGAGACT
AAGCTGGGAA TTATTCCAGG CTTTGGTGGT ACGGTACGTT TACCTCGCGT GATCGGTGCC
GACAACGCAC TTGAATGGAT CACATCGGGT AAAGACCAAC GTCCAGAAGC GGCACTTAAA
GTCGGCGCGA TTGACGCAGT TGTAGCTCCA GAGCAACTTA AACCTGCAGC GTTGAAAATG
CTAAAAGATG CCCTAATAGA GAAGCTAGAT TGGCAGACTC GCCGCGCTAA GAAACAGGCG
CCGCTAACAC TACCAAAGCT TGAAGCCATG ATGTCTTTCG CCACAGCTAA AGGCATGGTG
TTTAAAGTAG CTGGTAAACA CTACCCTGCA CCAATGGCAG TAATTAGTGT CATCGAACAA
GCCGCTCAGT TAGATCGTGC TGGTGCGCTT CAAGTGGAGC ATCAAGCGTT CATCAAGCTA
GCTAAAACAG AAGTCGCACA AGCATTGATT GGCATCTTCC TCAATGATCA GCTCGTAAAG
GGTAAGGCTA AGAAAGCGGG CAAGTTAGCT AAGAAAGTTA ACTCAGCTGC AGTACTTGGC
GCAGGTATCA TGGGTGGCGG TATCGCTTAC CAAAGTGCCA GCAAAGGTAC ACCAATTGTA
ATGAAGGATA TCGCTCAACC TGCATTGGAT TTAGGTTTGG GCGAAGCCGC TAAGCTGCTT
ACGGCACAAG TTAAGCGTGG CCGTTCAACC CCTGCTAAGA TGGCTGCAGT ACTGAACAAC
ATCACTCCAG CACTGGACTA TGCCCCAGTA AAAGATGCTG ACGTGGTGGT TGAAGCCGTT
GTCGAGCATC CAAAAGTTAA ATCTATGGTA CTGGCGGAAG TTGAACAGCA TGTCAGTGAA
GATGCCATCA TCACCTCAAA CACTTCGACT ATCTCTATCA ACCTACTGGC TAAGAGCCTT
AAAAAGCCTG AGCGTTTCTG TGGTATGCAC TTCTTCAACC CTGTGCACAA GATGCCGCTA
GTCGAAGTCA TTCGCGGTGA GAACAGCTCA GATGAAACCG TTGCCTCAGT TGTGGCTTAC
GCCAGCAAGA TGGGTAAGAC ACCTATCGTA GTTAATGACT GCCCAGGCTT TTTCGTTAAC
CGTGTACTCT TCCCGTACTT TGCCGGCTTT AGTGGCCTGC TTGCCGATGG CGCCGATTTT
GCTGCTATCG ACAAAGTGAT GGAGAAGCAG TTTGGTTGGC CAATGGGCCC TGCTTACCTG
CTCGACGTTG TCGGCCTTGA TACTGGCCAT CATGCACAAG CAGTAATGGC TGAAGGCTTC
CCAGACCGTA TGGGGAAAAC TGGTAAAGAT GCCATCGATG TGATGTTCGA AGCTGAGCGT
TTCGGCCAGA AGAACAGTAA AGGTTTCTAT CAGTACTCAG TTGACCGTCG TGGTAAGCCA
AAGAAAGATT TAGACCCAAC CAGCTATGAG TTACTACAAG CTGAGTTTGG TGAACAGAAA
GCATTTGAAT CAGATGAGAT CATCGCTCGC ACTATGATCC CTATGATTAT TGAGACAGTA
CGCTGTCTTG AAGAAGGAAT TATCGCTTCG CCTGCTGAAG CGGATATGGG CCTAGTTTAC
GGCCTTGGTT TCCCACCATT TAGAGGCGGC GTGTTCCGCT ACCTAGATAC TATGGGCGTC
GCTAACTTTG TCGCGCTTGC CGACAAATAT GCACACCTAG GTGGTCTATA CCAAGTGACC
GACACTATGC GCGAACTTGC CGCCAACAAT GGCAGCTACT ACCAGCAGGC TTAA
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| Protein sequence | MIYQSPTIEV ELLEDNIAHL CFKAQGSVNK FDRETIDSLN AALDSIKQDS SIKALMLSSA
KDAFVVGADI TEFLGLFAEE DTVLQSWLEQ ANVVFNKLED LPFPTISAIN GFALGAGCET
ILATDFRIAD TTARIGLPET KLGIIPGFGG TVRLPRVIGA DNALEWITSG KDQRPEAALK
VGAIDAVVAP EQLKPAALKM LKDALIEKLD WQTRRAKKQA PLTLPKLEAM MSFATAKGMV
FKVAGKHYPA PMAVISVIEQ AAQLDRAGAL QVEHQAFIKL AKTEVAQALI GIFLNDQLVK
GKAKKAGKLA KKVNSAAVLG AGIMGGGIAY QSASKGTPIV MKDIAQPALD LGLGEAAKLL
TAQVKRGRST PAKMAAVLNN ITPALDYAPV KDADVVVEAV VEHPKVKSMV LAEVEQHVSE
DAIITSNTST ISINLLAKSL KKPERFCGMH FFNPVHKMPL VEVIRGENSS DETVASVVAY
ASKMGKTPIV VNDCPGFFVN RVLFPYFAGF SGLLADGADF AAIDKVMEKQ FGWPMGPAYL
LDVVGLDTGH HAQAVMAEGF PDRMGKTGKD AIDVMFEAER FGQKNSKGFY QYSVDRRGKP
KKDLDPTSYE LLQAEFGEQK AFESDEIIAR TMIPMIIETV RCLEEGIIAS PAEADMGLVY
GLGFPPFRGG VFRYLDTMGV ANFVALADKY AHLGGLYQVT DTMRELAANN GSYYQQA
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