| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Spea_0011 |
|---|
| Symbol | |
|---|
| ID | 5660412 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella pealeana ATCC 700345 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009901 |
|---|
| Strand | - |
|---|
| Start bp | 15705 |
|---|
| End bp | 16142 |
|---|
| Gene Length | 438 bp |
|---|
| Protein Length | 145 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 42% |
|---|
| IMG OID | 641234518 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001499875 |
|---|
| Protein GI | 157959841 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG2258] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCATCAC TTATTGGCAT TGCATTTAAA ACTGAAAAAC GTGGTCAAAT GATTACGGTT
GAACAAGCCG AAGTTACCCA AGCTAAAGGT GTTGAAAACG ACATCTTTGG CCGTCCGGGG
AAACGCCAAA TCACCGTGAT GTCTATTCAG AAATGGCGGC TAGCCTGTAA TGAAATCGAC
AATCAACTCC CTTGGCTTAC TCGCCGAGCA AACTTACTTA TTGATGGCTT AAGTTTTTCC
TCACAAGATG TAGGTAAGCA ACTTATTATC GGCAAACTCA TTTTAGAGAT CACTGGTGAA
ACTGATCCCT GCGAAAAAAT GGAAATGGCT TACCCTGGAC TCGAGCAAGC ATTAATGTCT
GACTGGCGCG GTGGCGTAAC TTGTCGAGTG ATTACAGGTT CAAATATCAA AATAGACGAC
AATGTTGAAT TGCTATAG
|
|---|
| Protein sequence | MASLIGIAFK TEKRGQMITV EQAEVTQAKG VENDIFGRPG KRQITVMSIQ KWRLACNEID
NQLPWLTRRA NLLIDGLSFS SQDVGKQLII GKLILEITGE TDPCEKMEMA YPGLEQALMS
DWRGGVTCRV ITGSNIKIDD NVELL
|
|---|
| |