Gene Snas_6483 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6483 
Symbol 
ID8887711 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6838774 
End bp6839304 
Gene Length531 bp 
Protein Length176 aa 
Translation table11 
GC content62% 
IMG OID 
Productsingle-stranded nucleic acid binding R3H domain-containing protein 
Protein accessionYP_003515191 
Protein GI291303913 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value0.0896384 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGCGCCAA TAAGTGAAGC GGAAACCTCA GCAGCCCCAC AAGCGGATGA GAACGACACC 
GTGAACACCG ATGATCTGTT TGCCGAGAGT GAGATCGCGG CTGACTACCT CGAGGGTTTT
CTTGACATAA TCGACAGTGA CGGGGACATT GACGAGCTGA CTCGCGGCGA TCGGCCGGTG
GTGGAGATCG TCGGCAAGGG TCTGGGCAAG CTCATTGGGC AGAACGGCGC GACCCTGGAA
GCGCTGCAGG AGCTGGCCCG GCTGGCCGTC TACCGCAAGA CCGGCGAGCA CTCGCGGCTG
ATGTTGGATG TGGGTGGTTA CCGGGCGAAC CGGCGCAAGG AGCTCACCGA GCTGGCCGAG
AAGACGGTGC AGAAGGTGCT GGACTCCGGT CGGATGGTGC GGCTCGAGGC GATGAGCGCG
TTCGAACGCA AATGCGTTCA CGATGTGATC AACGCGACCG AGGGCGTGGA AAGCGAGTCC
GAGGGAAGCG AACCCAATCG GCGGATCGTG GTGCGGCCGG TAGCTTCATG A
 
Protein sequence
MAPISEAETS AAPQADENDT VNTDDLFAES EIAADYLEGF LDIIDSDGDI DELTRGDRPV 
VEIVGKGLGK LIGQNGATLE ALQELARLAV YRKTGEHSRL MLDVGGYRAN RRKELTELAE
KTVQKVLDSG RMVRLEAMSA FERKCVHDVI NATEGVESES EGSEPNRRIV VRPVAS