Gene Snas_6393 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_6393 
Symbol 
ID8887619 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6745592 
End bp6747100 
Gene Length1509 bp 
Protein Length502 aa 
Translation table11 
GC content65% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003515102 
Protein GI291303824 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones37 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGTGACG ACGTAGGAAT TCAAGAATTC ACTCACGCGG ACCTTAAACG ATATCGACAC 
AAGCTTCGGC GCTGTCTCGA CGCGTTGATT CTATTGACTG ACGGCGATCT ATTCGATGTA
GAGCGAACTT TAACCGGCAT GGAGCTTGAG CTGTCCCTTG TCGACGAAAG TGGCGAACCG
TCGATGACGA ACCACGAGGT TCTGTCCCAC CTCGCCGAGA ACGCCGTGGC CAACGGCGAC
TCGGTCCAGG ACGAACTTGG ACGGTTCAAT TTGGAACTGA ACCTCGGCCC GCGCCCGGTC
GCGGGCTTCG GTTTCGAGAC CTACGAGCAG CGATTGCGAC TGTGGTTGCA GGACGTCAAC
GACTGTGCCC GCAAGGAGCA CTCCTCGGTG GTCATGGTCG GCACCCTTCC CACGGTGCGC
CGCGAACACG CCCGGCTGGA CATCCTGTCC CGGCGGCCGC GTTACCGGCT GCTCAACGAC
CAGATCCTCT CGGTCCGCGG TGAGGACATC TCCCTCGACA TCTCGGGGGC GGAGACCCTG
CGCGCCCACA CCGACTCCAT CGCACCCGAA TCGGTCAACA CCAGCGTCCA GTTCCATTTG
CAACTGACCC CCGAACAGTT CCCCCGGTAC TGGAACGCGG CGCAGGCGAT GGCAGGGGTG
CAGCTGGCGA CAGCCGCGAA CTCCCCCTAT CTGTTCGGCA CCCAACTGTG GGCCGAGACC
CGGATCATCC TGTTCGAGCA GGCCACCGAC ATCCGCAACG GTGAGCTGCG CGTGCAGGGG
GTACGGCCCC GGGCCTGGTT CGGCGAACGT TGGATCACCT CCGCGACCGA CCTGTTCGAG
GAGAACCTCA AGTACTTCGT GCCGCTGCTG CCACAGTGTG TCTCGGAGGA CCCGATCGAG
AAGGTGAACT CCGGCGAGAT CCCGCAGCTG GGTGAGTTGC GGCTCCACAA CGGGACCATC
TACCGGTGGA ACCGTCCGGT CTACGACGTC GGTCCCGAGG GCCCGCACCT GCGGGTGGAG
AACCGGGTGG TTCCCGCCGG GCCGACACCC ATCGACATCT GCGCCAACAT GGCCTTCTAC
CTGGGGCTGG TCACGGCCCT GGCCGAGGCC GACATGCCCA TCTGGACCAA ACTGCCGTTC
GCGGTCGCCG AGCAGAACTT CCACGCCGCC GCCCGGCACG GCATCGACGC CCACCAGACC
TGGCCGGGCC TGGGTGAACT GCCCGCCCGA GTGCTGGTGT TGGATCACCT GCTGCCCAAG
GCCGCCGAGG GCCTGGCCGC CCTCGACGTC GACTCCGCCG TCGCCGAGCG GCTGCTGGCC
ATCATCGCCG GACGCTGCCG CAACGGTGTC AACGGCGCCG CGTGGCAGGT CAACTGCGTG
CAGCGGCTCC AGCAGCGGCA GGGTCTGTCA CGGACCCCGG CGCTGCACGA GATGCTCAGC
CGCTACGCCG AGCACGCCGC GACGAACACG CCGGTACACG AATGGCCGCC GGAGTTAAAG
TCCACATAG
 
Protein sequence
MGDDVGIQEF THADLKRYRH KLRRCLDALI LLTDGDLFDV ERTLTGMELE LSLVDESGEP 
SMTNHEVLSH LAENAVANGD SVQDELGRFN LELNLGPRPV AGFGFETYEQ RLRLWLQDVN
DCARKEHSSV VMVGTLPTVR REHARLDILS RRPRYRLLND QILSVRGEDI SLDISGAETL
RAHTDSIAPE SVNTSVQFHL QLTPEQFPRY WNAAQAMAGV QLATAANSPY LFGTQLWAET
RIILFEQATD IRNGELRVQG VRPRAWFGER WITSATDLFE ENLKYFVPLL PQCVSEDPIE
KVNSGEIPQL GELRLHNGTI YRWNRPVYDV GPEGPHLRVE NRVVPAGPTP IDICANMAFY
LGLVTALAEA DMPIWTKLPF AVAEQNFHAA ARHGIDAHQT WPGLGELPAR VLVLDHLLPK
AAEGLAALDV DSAVAERLLA IIAGRCRNGV NGAAWQVNCV QRLQQRQGLS RTPALHEMLS
RYAEHAATNT PVHEWPPELK ST