| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6386 |
|---|
| Symbol | |
|---|
| ID | 8887612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | - |
|---|
| Start bp | 6737418 |
|---|
| End bp | 6738566 |
|---|
| Gene Length | 1149 bp |
|---|
| Protein Length | 382 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | cell envelope-related transcriptional attenuator |
|---|
| Protein accession | YP_003515095 |
|---|
| Protein GI | 291303817 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 17 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 38 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGTAGCT ACCGCTCCGG TTCCGACCGT CCCCGCGCCA GCGCGCGCGT ACCGTCGGGG
CCGCGTGCCA CCGGTGGTCA CCAGTACTCC GGCAAGACCT ACGGCGGTGG CGGCGGACCG
CGGGTGAAGC CGCCGACCAA CACCGCCCGC ATGGTGGTAC TGACCTGTCT GGTCGTCTCG
CTGATCTTCA CGCTCGGCGG GATCGGCGCC TGGGGCTACG CGAAGTCGCT CAACAGCGGC
CTGGACCGCT TCGACGCCTT CGACGGCGTC AGCGACCGGC CCGAGGACGA CGACGGGCTC
AACATCCTGG TGCTGGGCAG CGACTCCCGC AACCCCGACT CCACCAAGGA CAGCCGCGCC
GACACGATCA TGATCGCGCA CGTGCCGTCC AACGGCGAGA AGGCGTACAT GATCTCGCTG
CCGCGCGACC TGTGGGTGAA CGTCCCGGCC GCCGGCGACT GGGGCGGCGG CAAGAACAAG
CTCAACTCGG CGTCGTTCTT CGGCGGCGTC CCGCTGATGG TGCAGACCGT CGAAGGCTAC
ACCGACGTCC ACATCGACCA CGTCATCGAG ATCGACTTCA ATGGACTCAT CAAGGTCGTC
GACGCGCTGG GCGGCGTCAC GATGAACGTC GAGGAGGCCG ACGCCCCCGA CTACGCCACG
CCCGGCAAGC TCACCTCGAT CCACAAGTAC AAGGGCAAGG AACCCCGGAC CTGGAAGGCG
GGCAAGCAGA CCCTCGACGG TGAGTCCGCT TTGGACTACG TCCGGCAGCG CAAGCAGTTC
AACGAGGGCG ACTTCGCGCG GATGCGGCAC CAGCGCGAAC TGCTGAAGGC CATGATGGAC
AAGGCGACCA GCGCGGGGAT CATCACCTCG CCCGGCTCGC TGACCGACTT CCTGTCCTCG
GTCACCGACG CGGTGAAGGT GGACAAGGAG TTCGACCTGA TCTCCACCGG GGTGTCGCTG
TCGAGCCTGC GCTCCAAGGA CCTGGTCTTC ATGGTCAGTC CCAACATCCC CAACGGCTAC
GACGAGGCCA CTGGCCAGAG CATCGTGGAG TCCGACAAGG AGAAGGCCTC GGCGCTGTAC
AAGGCCATCG CGGCCGACGA CATGGCGTCC TGGGCCAAGG ACCATCCCAA GGACGTCAAG
GGCTCCTGA
|
|---|
| Protein sequence | MSSYRSGSDR PRASARVPSG PRATGGHQYS GKTYGGGGGP RVKPPTNTAR MVVLTCLVVS
LIFTLGGIGA WGYAKSLNSG LDRFDAFDGV SDRPEDDDGL NILVLGSDSR NPDSTKDSRA
DTIMIAHVPS NGEKAYMISL PRDLWVNVPA AGDWGGGKNK LNSASFFGGV PLMVQTVEGY
TDVHIDHVIE IDFNGLIKVV DALGGVTMNV EEADAPDYAT PGKLTSIHKY KGKEPRTWKA
GKQTLDGESA LDYVRQRKQF NEGDFARMRH QRELLKAMMD KATSAGIITS PGSLTDFLSS
VTDAVKVDKE FDLISTGVSL SSLRSKDLVF MVSPNIPNGY DEATGQSIVE SDKEKASALY
KAIAADDMAS WAKDHPKDVK GS
|
|---|
| |