Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_6353 |
Symbol | |
ID | 8887577 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6700932 |
End bp | 6701630 |
Gene Length | 699 bp |
Protein Length | 232 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003515062 |
Protein GI | 291303784 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 26 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGACCACCC CTCCCCCCGA GTCCTTTGTC TACGAATCGC GCACGGTCGA TCCCCCGACC CGCAACAGCA CCGCCGAATT CGTGGCCGGT CTCCTGCGCA CCGAGATCGC CGACGGCAAA CGCCAGCCCG GCGACAAACT CCCCGAAGCC GAACTGTGCG AACTGCACCA GGTCTCCCGC AACACCCTCC GCGAGGCCTT CCAGCTCCTC ACCCACGAAC GCCTGGTGAT CCACAACCTC AACCGGGGCT TCAAGGTCCG CCGCCCCTCC GCGGAGGACC TCTCCGACAT CTACCGGGTC CGCCGCGTCA TCGAATGCGG CGCCATCCGC TCGGCCGTCA TCGTCCCCGA ACGCCTGGCG GGCCTCCAAC GAGCAGTCGC CGACGGCGAA CGCGCGGCCA AACAACACGA CGGCCGCGCC GTGGGCTCGG CCAACATCCA GTTCCACCGC TCCATCGGCT CCCTGGCCGA GAGCGCCCGC ATCGACGAGG TGATGAACCA GGTCCTGGCC GAACTGCGCC TGGTCTTCCA CGTCATGGGC AACCACGGCG ACTTCCATCT GCCGTATCTC CCCAGAAACC GCGAGATCCT CGACTGCCTG GCCGAACACG ACATCATGCG AGCCAGCCAG CTGCTGTCGA ACTACCTCGA CGACGCCGAG GAGCAACTAC AGGCGGCCTA CGAAGAGGCC GACTCGTGA
|
Protein sequence | MTTPPPESFV YESRTVDPPT RNSTAEFVAG LLRTEIADGK RQPGDKLPEA ELCELHQVSR NTLREAFQLL THERLVIHNL NRGFKVRRPS AEDLSDIYRV RRVIECGAIR SAVIVPERLA GLQRAVADGE RAAKQHDGRA VGSANIQFHR SIGSLAESAR IDEVMNQVLA ELRLVFHVMG NHGDFHLPYL PRNREILDCL AEHDIMRASQ LLSNYLDDAE EQLQAAYEEA DS
|
| |