| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6104 |
|---|
| Symbol | |
|---|
| ID | 8887325 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6463911 |
|---|
| End bp | 6465704 |
|---|
| Gene Length | 1794 bp |
|---|
| Protein Length | 597 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | |
|---|
| Product | YhgE/Pip N-terminal domain-containing protein |
|---|
| Protein accession | YP_003514821 |
|---|
| Protein GI | 291303543 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 24 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGACCGCCA TTCGTCTGGC CTTTTTGGAG CTTCGCCGGT TCCGCGGACA CCCGATCCGC
TACGCCGCAC TGGCCGTCGT CGTCCTGATG CCGCTGCTGT ACGCCGGTCT GTACCTGTGG
TCCGCCTGGG ATCCCTACGG CAGCCTCGAC AGGGTGCCCG TCGCCGTCGT CAACGAGGAC
GAGGGCGCCG AGATGGACGG CAAGAAGCTG CACGCCGGGA ACGAACTCGT CAAGCAGCTC
AAGGAAACCC CGTACTTGGA CTGGAACTTC GTCTCCGCCG ACGAGGCCGA GCGCGGCATG
AGCGAGGGCG ACTACTACTT CACCATCGCC GTCCCGGAGG ACTTCTCCAA GAACCTGTCC
ACACTGTCCG GGCTGGATCC GGAGCGGGCG CACGTGCTCG TGGAACTCGA CGACGCCAAC
GGTTACATCG TCGGCATCAT GGCCAAGACC GTCGAGGCCG AACTCCAGAA CCAGATCAAC
ACCGCCGTCT ACGTCACCTT CGCCAAGACC ATGTTCGGCA ACCTCACCGA ACTCGACGAG
GGCATCAAGA AGGCCGCCGA CGGGGCCGAC AAGATCGCCG ACGGCGCCTA CACCGCCGAC
GAGGGCGCCC AGGAGCTGGC CACGGGTCTC GGCAAACTCG AAACCGGCTC CGAACAGGTC
GCCGACGGCG TCGGCACCGT CAACGACGCC GTGCAGGGCA ACAAGGACAC GCTGATCGGT
TCCCTCGACA CCATCAAGAC CGGCGCCCAG ATCGGCACCG ACATCACCGA CGACCTGGCC
GGTGTGGACG AGGCGGAACT GGCCGAGATC TGCCAGGACG GCGGCCCGGT GTGCGACGCG
GTGACCCAGG CCGTCCAGAA GGCCAAACAG GACCAGTCCA AAGTCGACTC GCTCAACGAC
GTCGTCCAGA ACCTGTCCGG CGACAAGATC TCCCAGGACG CCCAGCAGAT GCAGGACCTC
GCCGACGGCG CCGACGAGGT CGCCGACGGC ATCGCGCAGG CCCAGAAGGG CGCCAACGAC
CTGGCCGAGG GCACCGCGAA ACTGTCCAAG GGCGCCGGTG AACTGTCGGA CCAGCTTTCG
CTCGCCTCCG ACAAGATCCC GTCCGCCGAC CCGGAACAGA ACGCCAAGGC CGCCGACGTC
CTGGGCTCCC CGGTGAGCAT CAAGGAGGAG AACGCCAACC CGGCCAAGAC CTACGGCCGC
GGTCTGGCCC CGTTCTTCTT CGGCATCGCG CTGTGGGTGT TCGGCCTGGT CGCGTTCCTG
GTGCTGCGCA CCGTGAACCC CCGCGCCCTG GCGGGTTCGG TGGGCGCGTT CAGCACCGCG
CTGGCGGGCT GGTTCCCGGC GCTGCTGTTG GGGATCCTCG GTTCACTGGC CCTGTACGTC
GTCGCCGACG TCGGCCTGGG CCTCGATCCG ATCAACATCG GCGGCACGAT CGGCCTGTGT
GTGCTGGCCA TCGCGGTGTT CTCGGCGATG GCGCACCTGC TGCGACTGGC GTTCGGGGCG
GCTGGTGGCG TCCTGGTCCT GGTGCTGCTC ATGGTGCAGC TGACCTCTTC GGGCGGCCTC
TATCCACTTC AGACGACGCC GGGGTTCTTC CAGGTGCTGC ACCCGTGTCT GCCGATGAGC
TACCTGGTGG ACGGTCTGCG GGTGACCATC TCGGGCGGCA ACGTCGACCA TCTGTGGCGC
GACGTGTGGG TGCTGGCCGC CTTCGGCGTC GGCACCGTCG CACTGTCGAC ACTGGTCACG
ATGTGGCAGC GCCGCTGGAG TATCTCGACG CTGCACCCGT CGCTGACCAT CTAG
|
|---|
| Protein sequence | MTAIRLAFLE LRRFRGHPIR YAALAVVVLM PLLYAGLYLW SAWDPYGSLD RVPVAVVNED
EGAEMDGKKL HAGNELVKQL KETPYLDWNF VSADEAERGM SEGDYYFTIA VPEDFSKNLS
TLSGLDPERA HVLVELDDAN GYIVGIMAKT VEAELQNQIN TAVYVTFAKT MFGNLTELDE
GIKKAADGAD KIADGAYTAD EGAQELATGL GKLETGSEQV ADGVGTVNDA VQGNKDTLIG
SLDTIKTGAQ IGTDITDDLA GVDEAELAEI CQDGGPVCDA VTQAVQKAKQ DQSKVDSLND
VVQNLSGDKI SQDAQQMQDL ADGADEVADG IAQAQKGAND LAEGTAKLSK GAGELSDQLS
LASDKIPSAD PEQNAKAADV LGSPVSIKEE NANPAKTYGR GLAPFFFGIA LWVFGLVAFL
VLRTVNPRAL AGSVGAFSTA LAGWFPALLL GILGSLALYV VADVGLGLDP INIGGTIGLC
VLAIAVFSAM AHLLRLAFGA AGGVLVLVLL MVQLTSSGGL YPLQTTPGFF QVLHPCLPMS
YLVDGLRVTI SGGNVDHLWR DVWVLAAFGV GTVALSTLVT MWQRRWSIST LHPSLTI
|
|---|
| |