| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_6093 |
|---|
| Symbol | |
|---|
| ID | 8887314 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Stackebrandtia nassauensis DSM 44728 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_013947 |
|---|
| Strand | + |
|---|
| Start bp | 6451328 |
|---|
| End bp | 6452845 |
|---|
| Gene Length | 1518 bp |
|---|
| Protein Length | 505 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 65% |
|---|
| IMG OID | |
|---|
| Product | TAP domain-containing protein |
|---|
| Protein accession | YP_003514810 |
|---|
| Protein GI | 291303532 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 22 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 26 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGACGAA AACGGCGAGC AGTGGGCTTC GCCGTCGCGG CCGCGCTGAC CGTGGCCGCG
GCGGTGACCG TAACCCAGAC GGCGATGGCC GACCCGGCAG CCGAGATCGA CTGGAAACCC
TGCAAGGACG CCGACGGTGA CGTCGAGTGC GGGACCATCG AGGTTCCGGT CGACTACGCC
AAACCCGACG GCAAGAAGAT CAAGATCGGC CTGGCCAAAC GAGCCGCCAC CAACCCCGAA
GCCAGGGTCG GATCGCTCAT GGTCGACCCC GGCGGACCGG GCGGCTCCGG CGTCGACATG
GTCAAGGGCT CGAAGATCGG GTCGAAACAG CTGCAGGAGA AGTTCGACTT CATCGGTTTC
GATCCGCGCG GCATCAACAC CAGCACCCAG ATCAAGTGCG ACGAAGAGCA GCTCGCCGCC
GCCAGGTCCG TCGGTGTGCC CACCACGAAG AAGAAGTTCG CCAAACTCGC CAAGGCCAAC
AAAAAGCTCG CCGACGGCTG CCGGAAACTG ACCGGCCCGC TGTTCGACCA CGCCGACAAC
CTGCACACCG TGGAGGACAT CGAGTCGGCG CGCAAGGCGC TCGGCGACGA GAAGCTCAAC
TTCCTGGGCT ACTCCTACGG CACCCTGATG GGGCAGCAGT ACGCCGAGAA GTACCCGAAG
AACATCCGCT CGATGGTGCT GGACGGCAAC ATGGACCACA GCATCGAATC CCCGTGGGAG
TTCGCCAGCA CCGAGACCGC CGCGGTGGAA CGCAACTTCA ACTCCTTCGC GAAGTGGTGC
GACGAGACCA AGGACTGCGC GCTGTACGGC GAGGACACCA CCAAGGTGTA CGGCGAACTG
CGCGACGCCG CCAGGGCCGG GAAACTCAAG GACCCGGAGA ACGGTGACCC CATCGACTTC
TACGCCTTCT CGGAGCGCGC TTCACTCATC AACGAGTCGC CCGCGTGGCC CGAAGTGGCC
AAGGACCTCA AGGTGCTGCG CGACGGCAAG GGCCAGCTGA AACTGGACGG CAAAGCCAAG
GCCGAACCCG TCGAGTACGT GTTCCAGTCG ATGTTCTGCT CCGACTGGGA CGTGTCGATC
AAGAACTTCG GCGAATGGCG GGACATCACC GACCGGCTCG CCGAGGAGTA CCCCAACACG
CAATGGTCGT CCTATGTGGG CACACTGACC TCGTGCATCG GCGACCCGGT GAAGACCACC
AACCCGCAGG CGCCGCTGGA GATCGACGGC GCTCCCCCGC TGGTGATGAT CGGCAACCTC
AACGACTACG CGACCGTTTA CGAGTGGTCC GAAGTGGCCG CCGAACAGTC CGGCGCGACC
CTCATCACCT ACGAGGGTTA CGGCCACACC ATCTACGGTC GCGGCGTGGA GTGCGTCGAC
AAGCCCGTCG AGTCGTACCT GATCGACCTC GAGGTTCCCG ACTCTGGGCT CAGCTGCGAG
TCCCAGGAGA CGCCGGGCGG CGGCGACTCC GGAAGACGCT CCGGTGCCCC TGGCACCGGT
CCGTGGGCGG GGCGTTAG
|
|---|
| Protein sequence | MRRKRRAVGF AVAAALTVAA AVTVTQTAMA DPAAEIDWKP CKDADGDVEC GTIEVPVDYA
KPDGKKIKIG LAKRAATNPE ARVGSLMVDP GGPGGSGVDM VKGSKIGSKQ LQEKFDFIGF
DPRGINTSTQ IKCDEEQLAA ARSVGVPTTK KKFAKLAKAN KKLADGCRKL TGPLFDHADN
LHTVEDIESA RKALGDEKLN FLGYSYGTLM GQQYAEKYPK NIRSMVLDGN MDHSIESPWE
FASTETAAVE RNFNSFAKWC DETKDCALYG EDTTKVYGEL RDAARAGKLK DPENGDPIDF
YAFSERASLI NESPAWPEVA KDLKVLRDGK GQLKLDGKAK AEPVEYVFQS MFCSDWDVSI
KNFGEWRDIT DRLAEEYPNT QWSSYVGTLT SCIGDPVKTT NPQAPLEIDG APPLVMIGNL
NDYATVYEWS EVAAEQSGAT LITYEGYGHT IYGRGVECVD KPVESYLIDL EVPDSGLSCE
SQETPGGGDS GRRSGAPGTG PWAGR
|
|---|
| |