Gene Snas_5980 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5980 
Symbol 
ID8887201 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6335061 
End bp6335975 
Gene Length915 bp 
Protein Length304 aa 
Translation table11 
GC content66% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514699 
Protein GI291303421 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones19 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones20 
Fosmid unclonability p-value0.476931 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGCAGACTC CATGCGCGGC GTTTCTGCGG GTGTACGAGC CGCTTGCCGC CTTCTCCGAC 
GAGCGGGCGG CACTGTGGCG CGAGTACGCC GAGGCCGGCC AGGCCGTTTC CGCGCGTGAG
GGACCCGCGA TACAGCGAAA ACTCGTGTAC GAAGCGATGA ACCCCGAATG GGACATTCTT
CCCCGGGTCC CCGAGCAGGC CTACGTCCTC GACACCGAGG ACGGGCCGCT GATCTGTCCG
TGGGAGCTCA ACGAACGCAG TGCCGCGGCG GTGCGCGGCA TCGGCGACCA GGTGCCGCGC
AACCTCGTCG ACGCCTTCGC GCCCCGGCGG CTGACCATGA TGGCGGGGGC GATGTCGGCC
GGCCCGGACG CCCGCGGCGA CTCCGATGCG GGCCCGTGCT GGCACGAGCA CGTGGCGATG
TGGCACGTCC CGACCAAGTG GTTCGCGTGC GTGGAGTCCT CGGAGCGGGA ACTGGTGCTG
GAACCGGGCA AGCGTGGCCT GCGGTACCGG GTGCCGATGG CGCGGGCCCG GCGTCGGGCA
CGGCGGGCAT ACGGAATTTT GCAAACTTCT CTGGGACGAA GCAACCCCGT GGCCGTCAGC
GTCCGTCAAG TCTCCGAGTG GCTTTCCGTT TTCCACCCAC GATCTATGGT CGAAGTGGAC
TATGGTGGGT TGGTCTGGGT ACTATCCGAC GCCGACTTGC GTGGCGATGA CTCGCCGCAG
CTGGTGCACG ACGGGTTGAC GGCCCTGGCC CGTGGCGATG TCGTCGCGGC CGGTCGCGGC
TACGAGCAGC TGATGCGGCG GTGGCGGGTG ATCCGACTGC GGGAACGGAG CAACTTATGG
ACGAAAACGC TGACATATAC CCCTAAAACC GGAAATATCA GTGTTTTCCC CACCTGTCGG
TTGAATCGCT TTTGA
 
Protein sequence
MQTPCAAFLR VYEPLAAFSD ERAALWREYA EAGQAVSARE GPAIQRKLVY EAMNPEWDIL 
PRVPEQAYVL DTEDGPLICP WELNERSAAA VRGIGDQVPR NLVDAFAPRR LTMMAGAMSA
GPDARGDSDA GPCWHEHVAM WHVPTKWFAC VESSERELVL EPGKRGLRYR VPMARARRRA
RRAYGILQTS LGRSNPVAVS VRQVSEWLSV FHPRSMVEVD YGGLVWVLSD ADLRGDDSPQ
LVHDGLTALA RGDVVAAGRG YEQLMRRWRV IRLRERSNLW TKTLTYTPKT GNISVFPTCR
LNRF