Gene Snas_5959 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5959 
Symbol 
ID8887180 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6319980 
End bp6320795 
Gene Length816 bp 
Protein Length271 aa 
Translation table11 
GC content67% 
IMG OID 
Productpeptidase S1 and S6 chymotrypsin/Hap 
Protein accessionYP_003514679 
Protein GI291303401 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.252451 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones23 
Fosmid unclonability p-value0.94497 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAACGTA AGACCATCGC CGTCGTCATG GCCGCCGTGG CCGTGGCGGC GGCTTCGGCC 
ACCGCCCTGG TCACCGGCAA CGCGTTCGCC GAGGACTCCG ACCCGAGCAC CAAGATCATC
GGCGGCAAAC CGGCCTCCGA GGACTACCCG TTCATGGCCT CGTTGCAGTA CGAGAAGAAC
GGCAACCCCG ACTCGCACCG CTGCGGCACC GCGCTGATCG ACGACCAGTG GGTGCTGACC
GCCGCGCACT GCGTGGTCAA CGACGACGGC ACCGTATGGG ATCCGTCACT GCTGCACATC
AAGATCGGCT CCACCGACAA CACCCAGGGC ACCGACGTCA AGATCGAAAA GATCGTCGCG
AACCCGGATT ACCTGGCGGG CAAGGAGAAC AGCGGCGACA TCGCGCTGCT GCACCTGGCC
GAGGCCCCCG ACGCCCCGGT CATCAAGCTC GGCGGCCAGC CCGAGGTCGG CTCGGACGTC
CGCGAGATCG GCTGGGGCCG CACCGTCGGC GACGACCCGA ACTCGATGCC GAAGGAACTC
CAGGAACTCG ACACCAAGGT CCTGGACAAC GAGAAGTGCG TCTTCGGCGA CGAGTGGGAC
ATCACGAAGG GCGACGTCTG CGTCGAGTCC CCCGGCAACC AGGCCGGTGC CTGCAACGGC
GACTCCGGCA GCCCGCTGCT GCAGAAGGTC GACGGTGAGT GGGTGACCGT GGGCGTCGAC
AGCCGCTCGG GCGGCTCGAA GTGCCTGGAG ACCGACGAGG TCTACACCGG CGTCGCGCAC
TACACCGACT GGATCAAGAG CACCATCGAC GCGTAA
 
Protein sequence
MKRKTIAVVM AAVAVAAASA TALVTGNAFA EDSDPSTKII GGKPASEDYP FMASLQYEKN 
GNPDSHRCGT ALIDDQWVLT AAHCVVNDDG TVWDPSLLHI KIGSTDNTQG TDVKIEKIVA
NPDYLAGKEN SGDIALLHLA EAPDAPVIKL GGQPEVGSDV REIGWGRTVG DDPNSMPKEL
QELDTKVLDN EKCVFGDEWD ITKGDVCVES PGNQAGACNG DSGSPLLQKV DGEWVTVGVD
SRSGGSKCLE TDEVYTGVAH YTDWIKSTID A