Gene Snas_5943 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5943 
Symbol 
ID8887164 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6303653 
End bp6304930 
Gene Length1278 bp 
Protein Length425 aa 
Translation table11 
GC content72% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514663 
Protein GI291303385 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones29 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGACCGTCG ACGAAACCGC GCCACCGCCG AACCGGGACT CCGCGTCCGG CGAGGCGGAA 
CCGGTCGTCG CCGATCCGGA CGAAGCCCTC ACCCCCGCGC GGCTGCGGCC CCGGGACATC
GTGCGGGTCG GCGCGGTGGG TCTGCGCACC CGGCCGTTGC GGGCGTTCCT GTCCGCGCTG
GGCATCGCCA TCGGCATCGC CGCCATGGTG TGCGTCGTGG GCATCTCGTC CTCGTCGCAG
GCCGAACTGG ACCGCACCCT GTCGGCACTG GGCACCAACC TGTTGTCGGT CACCCCCGGC
AGCACGCTCA CCGGGGAGAC GTCCGAGTTG CCGCTGGAGG CCGAGGACAT GATCGCTCGC
ATGGACGGAG TCCAGGAGGT GTCGGCGGTC GGCAAGGTCG CCGACACGCA GGTGTACCGC
TCGGAGAAGA TCGACCGCAA CGACACCGGC GGCATCACCC CGTACGCGGC CCGGCTCGAC
CTGCCGGACG TGCTGGGTGC CACGATGCGC GACGGCACCT GGCTCAACGC CGCCACCGCG
AAGTTCCCGG CGACCGTGCT GGGGTCGTCG GCGGCCGAGC GGCTGGGCAT CGGCGAGGCC
GACCTGGGCA CCCAGGTGGT CATCGGCGGG CAGCGGTTCA CCGTCGTGGG CATCCTGGAT
CCGATCGCGC TGGCCCCCGA CCTCGACAAC GCCGTCATGG TCGGCTGGCC GGTCGCCAAG
GCGGAACTGG GTTTCGACGG GCACGCCACC GAGGTCCACA CCCGCAGCGA CGAGTCGAAG
CTGGAGGCGG TGCGCTCGAT ACTGGGCGCC ACCGCCAATC CGCAGGCGCC CAACGAGGTC
GAGGTGTCGC GTCCCTCCGA CGCCCTGGCC GCCAAGCAGG CCACCAACCA GGCGTTCACC
AGTCTGCTGC TGGGCCTGGG CGCGGTGGCG CTGCTGGTCG GCGGCGTCGG GGTGGCCAAC
ACGATGGTCA TCTCGGTGCT GGAACGCCGT CCCGAGATCG GGTTGCGCCG TTCGCTGGGC
GCCACCCGGG GTCAGATCCG CGCGCAGTTC ATCGTCGAGT CGCTGCTTCT GTCCCTTCTG
GGCGGAGTCA GCGGCCTGAT CCTGGGGCTG GGCGTCACCA CCGGGTACGC GTTGTCGCAG
GGCTGGCCCC CGATCGTGCC GAGTTGGGCG TCGGGACTCG GCTTGGCGGC CACCGTCCTC
ATTGGCGCCG TGGCCGGGTT GTACCCTGCG GTGCGGGCGT CGCGATTGCC ACCCACCGAG
GCATTGGCGG CGCACTGA
 
Protein sequence
MTVDETAPPP NRDSASGEAE PVVADPDEAL TPARLRPRDI VRVGAVGLRT RPLRAFLSAL 
GIAIGIAAMV CVVGISSSSQ AELDRTLSAL GTNLLSVTPG STLTGETSEL PLEAEDMIAR
MDGVQEVSAV GKVADTQVYR SEKIDRNDTG GITPYAARLD LPDVLGATMR DGTWLNAATA
KFPATVLGSS AAERLGIGEA DLGTQVVIGG QRFTVVGILD PIALAPDLDN AVMVGWPVAK
AELGFDGHAT EVHTRSDESK LEAVRSILGA TANPQAPNEV EVSRPSDALA AKQATNQAFT
SLLLGLGAVA LLVGGVGVAN TMVISVLERR PEIGLRRSLG ATRGQIRAQF IVESLLLSLL
GGVSGLILGL GVTTGYALSQ GWPPIVPSWA SGLGLAATVL IGAVAGLYPA VRASRLPPTE
ALAAH