Gene Snas_5854 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5854 
Symbol 
ID8887070 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6218302 
End bp6219351 
Gene Length1050 bp 
Protein Length349 aa 
Translation table11 
GC content73% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514576 
Protein GI291303298 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones14 
Plasmid unclonability p-value0.430762 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones24 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGACCGG TACGCTTCGT CGCCCTGTCA GAGGACGGGC AGGCTCTTGT AGTCGCCGAC 
GAGCTCGGCC GACTCATGGG ACTGCCCCTG GACGACAGGC TGCGCACCGC GGTCCAGGGC
GAGCGGACCG AAGCCGAACC CGCCTCTCAT CCCATTGTGG ATCGTCGCGT GCCGCAGGTC
TCGCTGTCAC CTCGGGACAT CCAGACTCGT ATCCGTTGTG GAGAATCGGC CGAGGACATC
GCGCGCGGCG CGGGTGTCGC GGTCGACAAG GTGCTGCGCT ACGCCGGCCC GGTGTTGCAG
GAACGTGCCA TGCTCGCGCA GGCCGCCCGC CGCGCCCGCC TGGCCAACTC CGACCGGGGC
GAGCGCATGT CCGACGTCGT GGACGTCAAG CTCGGCCAGC ACGGTGTCGA CACCGCCTCG
GTGTCGTGGG ACGCGTGGCG CCGTGAGGAC GGCACCTGGC GGGTCTCCGC GACGTGGACC
AGCGGAAAGT CCACCGCCCA GGCGACCTGG GAACTCGACC GGGGCCGCCA GAGCGTGACC
CCGCACGACG AGATGGCCCA GTTCCTGTCG ACTCCGGCTC CGGCCACGGT GCGTTCCTCG
GACTCCGAGG TCGCCAGCGC CCGGACCCCG TCGCCGTCGG CGCGGCCGTC CCGCGACCCG
CTGTACGGCG TGACCCGCCG CGACACGCAA CAGACTCCGG CGGCCAAGCA GCCCGAACCC
GCCTCCGACC GCCCGGACCC GCTGCGCCGC GACGCACTCC GCGCGGCACT GGAACGCCCG
CTGGGCGAAC CGTCGCGTCC GGACCGCCAG GCCGCCAGCG GCCTGGGTCT GCCGGGCTCC
GAGCCCGCCG AGGTCAAGGA CACGCCAGCG GTTCCGTCGC TGGCGGTACT GCGTCCGCGC
CGCAACGAGG TCGTGGACGA GGACGAGTCG GGCGACGAAC CGAAGGTCGC GGTGGCCGCG
GGTGCCTCGA GCAAACCGCG CAACCGGCTG CCCGCCTGGG AGGACGTCCT GTTCGGCAGC
GACACGGCCC CGCGCTCCAG CCAGCCGTAG
 
Protein sequence
MRPVRFVALS EDGQALVVAD ELGRLMGLPL DDRLRTAVQG ERTEAEPASH PIVDRRVPQV 
SLSPRDIQTR IRCGESAEDI ARGAGVAVDK VLRYAGPVLQ ERAMLAQAAR RARLANSDRG
ERMSDVVDVK LGQHGVDTAS VSWDAWRRED GTWRVSATWT SGKSTAQATW ELDRGRQSVT
PHDEMAQFLS TPAPATVRSS DSEVASARTP SPSARPSRDP LYGVTRRDTQ QTPAAKQPEP
ASDRPDPLRR DALRAALERP LGEPSRPDRQ AASGLGLPGS EPAEVKDTPA VPSLAVLRPR
RNEVVDEDES GDEPKVAVAA GASSKPRNRL PAWEDVLFGS DTAPRSSQP