Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5853 |
Symbol | |
ID | 8887069 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 6217468 |
End bp | 6218244 |
Gene Length | 777 bp |
Protein Length | 258 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | |
Product | transcriptional regulator, TetR family |
Protein accession | YP_003514575 |
Protein GI | 291303297 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.389129 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 24 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGGGCGAAC AGCACCGAGC GCCTGCACCG ACGGGCATCG AACTGGCCTG GCGAAGCTCC AGTCACGCGG CTCACCCGGG CGCACCGAGC GGTGGCCGCA GGCCCGGCCC ACGATCAGGC CTCACGCTGG GACGGATCGT CACGGCCGCC GTTGACATCG CCGACCGGGA AGGGCTCGCC GCCGTATCAC TGGCTCGCGT CGCGGCCGCC CTGGGCACCG CGACGACTTC GCTGTACCGG CACGTCCGAT CCAAAGACGA CCTCGTCGTG GTGATGCGCG ACGCCGCCGC CGCGCCACCA CCCGATCTGC CGCCGACCGA CCTCCGACGG TGGCGAGAGT CGCTGGCCGA CATCGCCTGG CGGATATACG ACCTCTACCG GCAACACCCG TGGGTCCTGC AGGTGCCCAC CTCTGGCCCG CCGAACACAC CGAACGAACT CCTGTGGGGC GAGCACATGC TCAAGGCCCT GTCACAGTCC ACCCTGACCG CCCACGACCA GCTCCGCGCC GTCACGCTGA TCTCCGGCTA CGTCCGCGAG CAGGCGCGAC TCACCCTGGA TCCGATCATC GCGGACGGCG GCGATGCCGC GGCAGGCGAT TACTTCGCTT TCCTCGGCAG GGTTCTGACG CCGAAGCGGT ATCCCATGTT CTGCCGCCTG TTCGCGGACC CGGCGAACAC CGGCTCCATC GAGTACACCG CCGCGGACTT CCAGTTCGGT TTGGACCGGA TTCTGGCCGG ACTGGCCGAA CTCGACCGGG ACGGCCGCGC CCGGTAA
|
Protein sequence | MGEQHRAPAP TGIELAWRSS SHAAHPGAPS GGRRPGPRSG LTLGRIVTAA VDIADREGLA AVSLARVAAA LGTATTSLYR HVRSKDDLVV VMRDAAAAPP PDLPPTDLRR WRESLADIAW RIYDLYRQHP WVLQVPTSGP PNTPNELLWG EHMLKALSQS TLTAHDQLRA VTLISGYVRE QARLTLDPII ADGGDAAAGD YFAFLGRVLT PKRYPMFCRL FADPANTGSI EYTAADFQFG LDRILAGLAE LDRDGRAR
|
| |