| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Snas_5755 |
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| Symbol | |
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| ID | 8886971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Stackebrandtia nassauensis DSM 44728 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_013947 |
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| Strand | + |
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| Start bp | 6117914 |
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| End bp | 6119548 |
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| Gene Length | 1635 bp |
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| Protein Length | 544 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | |
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| Product | ABC-type sugar transport system periplasmic component-like protein |
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| Protein accession | YP_003514478 |
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| Protein GI | 291303200 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 0.813391 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 28 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTCGGATT TCAACCTGAA ACGGCGTGAC GCCCTCAAGA TGGGCGGGGT CGCCGCGCTC
GTCTCGACCG CCGGACCGGC CCTGGTGGCC TGTAGCGGCG GCGGTGGCGG CGACGTCAGC
AACAAGGGCA AGGACCTGGT CCCCTACCCC GACTACATCA AGGCCGACGG TCCCGAACCC
GACCTGCCCG GCGACGAGAA GACCGGCCTG CAGGGCGGAT ACACCAAGTA CCCCAAGGAG
ATCGAGTCGA CCGGCTGGGA CAAGCCGGGC GACGGGTCGA AGGTGCGCGC CGCGATCATC
ACCTACGGGG TGCCGCCCAA GAAGAACGAC TCCTTCGTCA AGGCCGTCAA CGACGCGCTC
GGCGTCGAAC TGGACATCGA GCTCATGCCC GGCAATGAGT GGAAGGAGAA GATGACCACG
CTGACCGCCA GCGACGACAT GCCCGACATC GTCATGTTCG GCGTCGGCGA GATCATCCCC
CGCGAACACG AGTTCATCCA GGCCAACTGC GCCGACATCT CGGATCTGGT CAGCGGCGAC
AACATCAAGG ACTACCCCGG CCTGGCCAAC ATCCCCACCT ACGCATGGAA GGGCGTGGGA
CGCATCGGCG GCAAGCTGTA CGGCATCCCC ACCGAGCGCC CCGTGTTCGG CGGCTGCCTC
ATGGTCAACC GCACCGCACT GGACAAGGTG GACGCTCCGG TCGAGTGGAC CAAGGACGAG
TACGTCAAGG CCATGGCCGA GTTGACCAAG GGCAAGAAAT ACGGCCTGGG CATGTCCAAC
GACCTGTGGA TCGACTACTG GGCCGGATCT CTGGGCGCCC CCAACGAGTG GAAGGTGTCG
GGCGGCAAGT TCACCACCGC CTTCGAGACC GACCAGTTCA AGGGCGCGAT CGAGATGCTG
GCCAAGCAGT TCGCCGACAA GCACGTCTAC CCCGACAGCC CCAACCAGCC CAACATCGAG
AACAAGACCC ACTACGCCAA CACCACCGTC CACGCCTACC GCGACGGCTG GGGTGCCATG
GGCACCAAGG CGTTCCAGGA CGCCAAGGAC GGGTACACCC TCGACTTCGG TTACCCCTTC
GCCGACACCG ACCCCACGCC GTGGGCCGGG AACGGCTACT TCGGGTACGT CGTGTTCAAG
AAGGCCAAGA AGGAGCGGCT GAAGATGCTG CTCGACATCT GCAACTACCT GGCGGCGCCG
TTCGGCACCA AGGAGTACGA GCTGTTCAAC TACGGCGTCG AGGGCAAGCA CTTCGAGCGC
GACGGCGACG GCGTCCCGAT CGCGACCAAG CTGTGGGAGA AGGAGAACAA GACCAACTAC
CCGATCTCCT ATATCTCCGC CGCGCCGCTG ACGCTGTTCT ACCCGGGCTA CCCCGATCAG
GTGGAGCGGG TCTACGAGTG GGAGAAGAAG GTCGCCGGGA TAACCATCCC CAACCCGATG
ACGGGGCTGC GCTCCAAGGC CGTCACCCAG AAGTACAACG AATGCCGCAA GACCGTCCTG
GACGGTGTCC TGGACGTCAT CTTCCGCGGC AAGGACATGA AGAGCTTCGA CGAGACGCTC
AAGAAGTGGC ACTCCAAGGG CGGCGACGTC ATGGCCGAAG AACTCGCCGA GGAGTACGAG
GCGTCTGAGG AATAA
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| Protein sequence | MSDFNLKRRD ALKMGGVAAL VSTAGPALVA CSGGGGGDVS NKGKDLVPYP DYIKADGPEP
DLPGDEKTGL QGGYTKYPKE IESTGWDKPG DGSKVRAAII TYGVPPKKND SFVKAVNDAL
GVELDIELMP GNEWKEKMTT LTASDDMPDI VMFGVGEIIP REHEFIQANC ADISDLVSGD
NIKDYPGLAN IPTYAWKGVG RIGGKLYGIP TERPVFGGCL MVNRTALDKV DAPVEWTKDE
YVKAMAELTK GKKYGLGMSN DLWIDYWAGS LGAPNEWKVS GGKFTTAFET DQFKGAIEML
AKQFADKHVY PDSPNQPNIE NKTHYANTTV HAYRDGWGAM GTKAFQDAKD GYTLDFGYPF
ADTDPTPWAG NGYFGYVVFK KAKKERLKML LDICNYLAAP FGTKEYELFN YGVEGKHFER
DGDGVPIATK LWEKENKTNY PISYISAAPL TLFYPGYPDQ VERVYEWEKK VAGITIPNPM
TGLRSKAVTQ KYNECRKTVL DGVLDVIFRG KDMKSFDETL KKWHSKGGDV MAEELAEEYE
ASEE
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