Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5692 |
Symbol | |
ID | 8886907 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | - |
Start bp | 6055285 |
End bp | 6056085 |
Gene Length | 801 bp |
Protein Length | 266 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | |
Product | RNA polymerase sigma-24 subunit, ECF subfamily |
Protein accession | YP_003514415 |
Protein GI | 291303137 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.47008 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGCCCGGCA CCGTACCGGT GGTCACCGCA GGAACCGTCA CGCCGCAGTT TCAGGCGTCT CGCCAAACGC TGCGCGATGG TCTCACCAGT CTGCGGCAGA TGCTGACCGT AGACCTGAAT CCCTCCCGAG TCGAGGCTCC GTCCCCGGCT TCCGACGGGG ATCGAGAGGA GCCCTCCTGT AACAGCGGGG AGGACGACTC CGGTCAACCC GACTCGCAGT CCTGCTCGGC GGAGGTGGGT CCCGCCGAGG TCCGGGAGCT CGTCGCCCGG GCCCAGGACG GCGACGTGGA CGCCTTCGGG CGCATCTACG ACCGCTACAA CGAGATCGTG CACCGCTACA TCTACTTCCG GGTCGGCAAC CGGCAGCTCG CCGAGGACCT GACCTCGGAG GTGTTCCTGC GGGCACTGCG CCGCATCTCC ACCTTCACCT GGCAGGGCCG TGACTTCGGC GCCTGGCTGG TCACGATCGC CCGCAACCTG GTCGCCGACC ACTTCAAGTC CGGTCGCTAC CGGCTGGAGA TGTCCACCGC CGAGGTGCTG GACATCGACC GCGAGGAGCG GGCGCCGGAG GGCAACCCCG AGGACACCGT CTGCGACAAG CTCCTCAACG TCACCCTGCT CAAGGCCGTC CGGGAACTCA ACCCGGACCA GCGCGAGTGC ATCGTGCTGC GGTTCCTCCA GGGGATGTCG GTGGCCGAGA CCGCCGGATA CATGCGCAAG AACGAGGGCG CCATCAAGGC GCTCCAGTAC CGGGCCGTTC GCACACTCGC GAGATTGCTT CCGGAGGGAT TTGGCCGATG A
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Protein sequence | MPGTVPVVTA GTVTPQFQAS RQTLRDGLTS LRQMLTVDLN PSRVEAPSPA SDGDREEPSC NSGEDDSGQP DSQSCSAEVG PAEVRELVAR AQDGDVDAFG RIYDRYNEIV HRYIYFRVGN RQLAEDLTSE VFLRALRRIS TFTWQGRDFG AWLVTIARNL VADHFKSGRY RLEMSTAEVL DIDREERAPE GNPEDTVCDK LLNVTLLKAV RELNPDQREC IVLRFLQGMS VAETAGYMRK NEGAIKALQY RAVRTLARLL PEGFGR
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