Gene Snas_5662 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5662 
Symbol 
ID8886877 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp6017786 
End bp6018502 
Gene Length717 bp 
Protein Length238 aa 
Translation table11 
GC content68% 
IMG OID 
Producthypothetical protein 
Protein accessionYP_003514385 
Protein GI291303107 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones18 
Fosmid unclonability p-value0.169553 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAACGACA ATCCGCTGAT CGCTGACGTC GACGAGTCCA CCACCGGCAC GTCCGGGCTG 
TGGCTGGTGG AGGACACCCA GCTGCTCATC GACGCGATCG AGTCGGGCTC CTGGGTGGAC
GGCGTGATCG GCGGTATCAC CGTCGGCCTG GACGTCCTGT CGGCAGTCTT GGATCCGTTG
GGCGCCTTGG TCTCCATGGC GATCGGCTGG CTCATCGAGC ACATCAAGCC CTTGCGTGAC
GCGCTGGAGA AGGTCACCGG CGACGCCGAC AAGGTGAGGT CCTACGCCAA GACCTGGGAC
AACGTCTCCG CCAAACTCGT CGGCGCCGGA ACCGACCTGC AATCCGCCGT CCACAAGGAT
CTGGAGACCT GGCAGAGCCC GGCCGCGAAC GCGTACTCGA TCCACGCCGA CTACACGACC
AACGCCGTGG GTGGCGTCGG AGCGCTCGCC GGGGTCCTGG CCGCGGCCAC CGAGGGGGCC
GGGATGCTGG TCGCCACCAC CCGCGCGATC GTGCGCGACC TGATCGCCGA ATGCGTGACG
ACCCTGCTGG TGCGGATCCC GCTGTGGCTG GCCGAGATCG GCCTGACCCT GGGGCTGGGG
ACGGGATGGG TGATCGCCCA GGTCGACTCG CTGATCGCCA AGTGGGTCGC CCGGATCACC
AGCTACCTCA ACTCGCTGGT CGCCAGCCTC TCCAACCTGC AGGCGCTGCT GGCCTGA
 
Protein sequence
MNDNPLIADV DESTTGTSGL WLVEDTQLLI DAIESGSWVD GVIGGITVGL DVLSAVLDPL 
GALVSMAIGW LIEHIKPLRD ALEKVTGDAD KVRSYAKTWD NVSAKLVGAG TDLQSAVHKD
LETWQSPAAN AYSIHADYTT NAVGGVGALA GVLAAATEGA GMLVATTRAI VRDLIAECVT
TLLVRIPLWL AEIGLTLGLG TGWVIAQVDS LIAKWVARIT SYLNSLVASL SNLQALLA