Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Snas_5635 |
Symbol | |
ID | 8886850 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Stackebrandtia nassauensis DSM 44728 |
Kingdom | Bacteria |
Replicon accession | NC_013947 |
Strand | + |
Start bp | 5990158 |
End bp | 5990904 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | |
Product | transcriptional regulator, GntR family |
Protein accession | YP_003514358 |
Protein GI | 291303080 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.613764 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 0.0151666 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCTGGAAA GTGGTCAGGT GCGGCGGGGT GTACCCGAAC ATGGCAGGGT GCCCAAGTAC TTCGCGGTGA AGGCTCGGCT GGTGACCCTG ATCGGTGAGA TCGGCGAGGG TGAGATGTTG CCGCCGGAGC GGGAGCTGGC GGCGCGGTTC GAGGTGAGTC GTGCCACGGT GCGGCAGGCG ATCTCGGAGC TGATCCTGGA GGGACGGCTG GCGGCGCGGC AGGGACGGGG AACCTATGTG GCCCCGCCCA AGACGATTCA TCCGCTGGAG CTGGTGTCGT ACACCGAGGC GGTGGCGAGC ATGGGACGCA GACCCGGGCG GCGGGTGGTG TCGGCCGAGC GGATCGACGC CAGCGACGAA CTCGCCGAGC GGTTGCGGAT CGGCAAGCGG GCCAAGGTGA TTCACCTGGA GCGGGTGTTG CTGACCGATG AGGAGCCGAC CGGTTTGGAG AGCACCTATC TGCCCGCGGC GCGGTTTCCG CGGTTGCTGG AGGTCTTCGA TCCGGCGGCG TCGCTGTATC GGTGTCTGCA GGACGAGTTG GGTGTGGTGT TCGACGAGGC GGACGAGCGG ATCGAGACCG CGTTGGCCTC GCCACGGGAG GCGCTGTTGC TGGAGACGAA TCCGGCGCAG CCGATGTTGC TGTTGCACCG GGTTTCCTAT GACCCGCAAG GGGTTCCGAT CGAGTTGGTG CGGACGTTGT ATCGGGGAGA CCGGATCGGG TTCTCGACCC GGTTGCGGGC TCGCTGA
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Protein sequence | MLESGQVRRG VPEHGRVPKY FAVKARLVTL IGEIGEGEML PPERELAARF EVSRATVRQA ISELILEGRL AARQGRGTYV APPKTIHPLE LVSYTEAVAS MGRRPGRRVV SAERIDASDE LAERLRIGKR AKVIHLERVL LTDEEPTGLE STYLPAARFP RLLEVFDPAA SLYRCLQDEL GVVFDEADER IETALASPRE ALLLETNPAQ PMLLLHRVSY DPQGVPIELV RTLYRGDRIG FSTRLRAR
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