Gene Snas_5635 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSnas_5635 
Symbol 
ID8886850 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameStackebrandtia nassauensis DSM 44728 
KingdomBacteria 
Replicon accessionNC_013947 
Strand
Start bp5990158 
End bp5990904 
Gene Length747 bp 
Protein Length248 aa 
Translation table11 
GC content67% 
IMG OID 
Producttranscriptional regulator, GntR family 
Protein accessionYP_003514358 
Protein GI291303080 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones16 
Plasmid unclonability p-value0.613764 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value0.0151666 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCTGGAAA GTGGTCAGGT GCGGCGGGGT GTACCCGAAC ATGGCAGGGT GCCCAAGTAC 
TTCGCGGTGA AGGCTCGGCT GGTGACCCTG ATCGGTGAGA TCGGCGAGGG TGAGATGTTG
CCGCCGGAGC GGGAGCTGGC GGCGCGGTTC GAGGTGAGTC GTGCCACGGT GCGGCAGGCG
ATCTCGGAGC TGATCCTGGA GGGACGGCTG GCGGCGCGGC AGGGACGGGG AACCTATGTG
GCCCCGCCCA AGACGATTCA TCCGCTGGAG CTGGTGTCGT ACACCGAGGC GGTGGCGAGC
ATGGGACGCA GACCCGGGCG GCGGGTGGTG TCGGCCGAGC GGATCGACGC CAGCGACGAA
CTCGCCGAGC GGTTGCGGAT CGGCAAGCGG GCCAAGGTGA TTCACCTGGA GCGGGTGTTG
CTGACCGATG AGGAGCCGAC CGGTTTGGAG AGCACCTATC TGCCCGCGGC GCGGTTTCCG
CGGTTGCTGG AGGTCTTCGA TCCGGCGGCG TCGCTGTATC GGTGTCTGCA GGACGAGTTG
GGTGTGGTGT TCGACGAGGC GGACGAGCGG ATCGAGACCG CGTTGGCCTC GCCACGGGAG
GCGCTGTTGC TGGAGACGAA TCCGGCGCAG CCGATGTTGC TGTTGCACCG GGTTTCCTAT
GACCCGCAAG GGGTTCCGAT CGAGTTGGTG CGGACGTTGT ATCGGGGAGA CCGGATCGGG
TTCTCGACCC GGTTGCGGGC TCGCTGA
 
Protein sequence
MLESGQVRRG VPEHGRVPKY FAVKARLVTL IGEIGEGEML PPERELAARF EVSRATVRQA 
ISELILEGRL AARQGRGTYV APPKTIHPLE LVSYTEAVAS MGRRPGRRVV SAERIDASDE
LAERLRIGKR AKVIHLERVL LTDEEPTGLE STYLPAARFP RLLEVFDPAA SLYRCLQDEL
GVVFDEADER IETALASPRE ALLLETNPAQ PMLLLHRVSY DPQGVPIELV RTLYRGDRIG
FSTRLRAR